Gene Sbal223_1850 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal223_1850 
Symbol 
ID7086524 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS223 
KingdomBacteria 
Replicon accessionNC_011663 
Strand
Start bp2181885 
End bp2182559 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content45% 
IMG OID643460754 
Producttwo component transcriptional regulator, winged helix family 
Protein accessionYP_002357778 
Protein GI217973027 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0826767 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.000859255 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGAATTT TGGTTGTTGA AGACGATCCT ATTTTATCCC ACCACTTAAA AGTGCAATTA 
AGCGATCTCG GCAATCAAGT TCAAGTGGCG CTCACTGCCA AAGAAGGTTT CTATCAAGCC
ACGAATTATC CCATCGATGT GGCTATTGTC GATTTAGGTT TACCCGATCA AGATGGCATT
AGCTTAATTG AACAACTCAG AGAAGCGGGT CTTAAAGCGC CGATATTAAT CCTCACCGCC
CGAGTTAATT GGCAGGATAA AGTCGAAGGC CTTAATGCTG GTGCCGATGA CTATTTAGTC
AAGCCCTTTC AAAAAGAAGA ACTCGTCGCG AGACTCGATG CCTTAGTACG CCGCAGTGCA
GGTTTTGTTA AACCTGTGAT TTGCAGTGGA GAATTAAAAC TCGATCTCGC CGCTAAACAA
GTCACCCTGA GCGATGAAAT CATGGAAGTC ACCGCCTTTG AATATTTGAT CCTCGAATAT
TTAATGCGTC ATTGCCATGA GGTGGTTGCC AAACAACGTT TGCTCGATGT GATTTATGGC
GATAAAGAAG GCGATCCGAA TACGATTGAA GTCATGGTCA GCCGCCTGCG CAAAAAACTG
ACCCGCGATG GGATAGACAA TCCTATCGTC ACCATTCGCG GCCAAGGATA TAAATTTAAC
CTGCCATGCA ACTAA
 
Protein sequence
MRILVVEDDP ILSHHLKVQL SDLGNQVQVA LTAKEGFYQA TNYPIDVAIV DLGLPDQDGI 
SLIEQLREAG LKAPILILTA RVNWQDKVEG LNAGADDYLV KPFQKEELVA RLDALVRRSA
GFVKPVICSG ELKLDLAAKQ VTLSDEIMEV TAFEYLILEY LMRHCHEVVA KQRLLDVIYG
DKEGDPNTIE VMVSRLRKKL TRDGIDNPIV TIRGQGYKFN LPCN