Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_1848 |
Symbol | |
ID | 7086522 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | + |
Start bp | 2179755 |
End bp | 2180450 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 643460752 |
Product | Prolyl 4-hydroxylase alpha subunit |
Protein accession | YP_002357776 |
Protein GI | 217973025 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.000431215 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.000791636 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGGACTTTA TTGAAGTATA CCCTAATGCG TTGCCGAATG ACTTGTGCGA CCGTCTCATT CTGGCATTTG AGCAACATGC TGGCGTTGTC GATGGACAAA CGGGCAATGG CGTTGATCTG GAGAAGAAGA TCAGCCGCGA TTTGACCTTA GATAGTTTCG CCGACTTGCA GCCCCTCAGA AACGAACTCT TAGGTTATAC CTTAAAGGGC GCGGTAGATT ATTTCACAAA GTATTCAATG GCGTTAATGG GCGCGGTCGC TGTGTCTGTG AGTGATGAAC AAGGACAACC TGTAACGCTA ACCCCTGCTA ATTTTGCGGC GCTGGGTGCA CCTAGAGCTG ATGGCTTAGT CAAGTATTTG TATCGCAGTG GCAGTATTAA TGTTCAAAAG TATCAGCAGA ATAAAGGCGG TTATCCCCAC TGGCATTCGG AGCAATTCCC GCAGAATGGT CACAATGAAG CCTTGCATCG CGTCGTGCTT TATATGTTTT ATTTAAATGA TGTGGAAGCG GGCGGTGAAA CCGAATTTTA TTATCAGCAG CGTAAAATTT CCCCGAAAAA AGGCACTATG GTGATAGCAC CAGCGGGATT CACTCATACG CATAGGGGTA ATAAACCTGT GAGTGGTGAC AAATACATTG CCACCTCTTG GATCATGTTC AATCGAGCAG AGCAGTTATA CGCTGTGATT GCCTGA
|
Protein sequence | MDFIEVYPNA LPNDLCDRLI LAFEQHAGVV DGQTGNGVDL EKKISRDLTL DSFADLQPLR NELLGYTLKG AVDYFTKYSM ALMGAVAVSV SDEQGQPVTL TPANFAALGA PRADGLVKYL YRSGSINVQK YQQNKGGYPH WHSEQFPQNG HNEALHRVVL YMFYLNDVEA GGETEFYYQQ RKISPKKGTM VIAPAGFTHT HRGNKPVSGD KYIATSWIMF NRAEQLYAVI A
|
| |