Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_1834 |
Symbol | sdhA |
ID | 7086508 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | + |
Start bp | 2164093 |
End bp | 2165859 |
Gene Length | 1767 bp |
Protein Length | 588 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 643460738 |
Product | succinate dehydrogenase flavoprotein subunit |
Protein accession | YP_002357762 |
Protein GI | 217973011 |
COG category | [C] Energy production and conversion |
COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
TIGRFAM ID | [TIGR01812] succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup [TIGR01816] succinate dehydrogenase, flavoprotein subunit, E. coli/mitochondrial subgroup |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00255629 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.274846 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGTATTC CAGTACGCGA ATTTGATGCT GTAGTGATCG GTGCCGGTGG CGCTGGTATG CGTGCAGCGC TGCAGATTTC CAAAGAAGGT AAAAGCTGTG CGCTTTTATC AAAAGTATTC CCAACTCGTT CTCATACCGT ATCTGCGCAG GGTGGTATCA CTGTTGCGTT AGGTAACGCC CATGAAGATC ATTGGGAACA GCATATGTAC GATACCGTGA AAGGTTCCGA TTTTATCGGT GACCAAGAAG CGATTGAGTT CATGTGTAAA ACCGGCCCTG AAGCCGTTAT TGAACTTGAG CAAATGGGTT TGCCTTTCTC TCGTTTCGAA AATGGCACGA TTTACCAACG TCCGTTTGGT GGTCAATCTA AGAACTTTGG TGGCGAGCAG GCTGCACGTA CTGCGGCAGC TGCCGACCGT ACTGGTCATG CTTTGCTGCA CTGTTTATAC CAACAAAACG TTAAGCATAA GACGCAAGTC TTCTCAGAAT GGTATGCATT AGATCTCGTT AAAAACGATG ATGGCGCCGT TGTGGGTTGT ACTGCGATTG AAATTGAAAC AGGCGATATC GTTTATTTCA AAGCCAAAGC AACGATTCTA GCGACAGGTG GAGCAGGGCG TATTTACGCT TCGACCACTA ACGCACATAT CAACACCGGT GACGGAGTCG GTATGGCAAT GCGTGCTGGC GTGCAAATGC AAGACATGGA AATGTGGCAA TTCCACCCAA CTGGCATCGC CGGCGCGGGT GTACTTGTGA CTGAAGGTTG TCGTGGTGAA GGCGGTTATC TGCTGAACAA AGACGGCGAG CGCTTCATGG AGCGTTATGC CCCTAACGCG AAAGATTTGG CATCACGCGA CGTGGTAGCA CGTTCAATGA TGACTGAAAT CCGCGAAGGT CGTGGTTTAG ACGGTCCATT AGGTCCACAC TGTTTACTCA AGCTTGATCA CTTAGGTAAA GAAACATTAG AAGCACGTTT ACCAGGCGTG TGTGAATTGT CTCGTACCTT TGCCCATATC GATCCGGCCG ATGGTCCAAT CCCAGTATTA CCAACCTGTC ATTACATGAT GGGCGGTCTG CCAACTAAGG TCAGTGGTCA AGTTATTCGT AAGAATGAAG ACGGCACTGA ACAAGATGTT ATCGGTCTGT TCGCTGTGGG TGAGATTGCC TGTGTATCTG TTCACGGTGC AAACCGCTTA GGTGGTAACT CATTGCTCGA CTTAGTGGTC TTTGGCCGCG CAGCGGGTCA GCATTTAGGT AAAGCTTTGG ATGAGACTGA CGATCCAAAA GACGCAAGCG ATGCGGATAT TCAAGCATCT CTGGCGCGTC TGAATCGTTG GGAAAGCAAT AAAGATGGCG AAGATCCAGC GCAAATCCGT AAGGATCTGC AACTGTGTAT GCAATTAAAC TTCTCTGTAT TCCGTCGTGG CGATGCTATG GCTGAAGGTT TAGAGCAGTT GAAAGTGATC CGCGAACGTC TTGCAAATGC TAAATTGTCT GATAACTCTC GTGAATTCAA CACTCAACGT ATTGAATGCT TAGAGTTAGA TAACTTAATG GCAACGGCGA TTGCAACGGC TTATGCGGCT AACTTCCGTA CTGAAAGCCG CGGTGCTCAC TCACGTGAAG ATTATTTAGA GCGTGATGAT GAGAACTGGT TATGCCACAG CTTATTTGAC CCAATCACTG AAACGATGGA TCGTCGTGCA GTGAACATGG CACCTAAGTT ACGTGAAGCA TTCCCGCCGA AGAAACGTAC CTACTAG
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Protein sequence | MSIPVREFDA VVIGAGGAGM RAALQISKEG KSCALLSKVF PTRSHTVSAQ GGITVALGNA HEDHWEQHMY DTVKGSDFIG DQEAIEFMCK TGPEAVIELE QMGLPFSRFE NGTIYQRPFG GQSKNFGGEQ AARTAAAADR TGHALLHCLY QQNVKHKTQV FSEWYALDLV KNDDGAVVGC TAIEIETGDI VYFKAKATIL ATGGAGRIYA STTNAHINTG DGVGMAMRAG VQMQDMEMWQ FHPTGIAGAG VLVTEGCRGE GGYLLNKDGE RFMERYAPNA KDLASRDVVA RSMMTEIREG RGLDGPLGPH CLLKLDHLGK ETLEARLPGV CELSRTFAHI DPADGPIPVL PTCHYMMGGL PTKVSGQVIR KNEDGTEQDV IGLFAVGEIA CVSVHGANRL GGNSLLDLVV FGRAAGQHLG KALDETDDPK DASDADIQAS LARLNRWESN KDGEDPAQIR KDLQLCMQLN FSVFRRGDAM AEGLEQLKVI RERLANAKLS DNSREFNTQR IECLELDNLM ATAIATAYAA NFRTESRGAH SREDYLERDD ENWLCHSLFD PITETMDRRA VNMAPKLREA FPPKKRTY
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