Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_1830 |
Symbol | |
ID | 7086504 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | - |
Start bp | 2160291 |
End bp | 2161355 |
Gene Length | 1065 bp |
Protein Length | 354 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 643460734 |
Product | efflux transporter, RND family, MFP subunit |
Protein accession | YP_002357758 |
Protein GI | 217973007 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0845] Membrane-fusion protein |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.000238284 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.23398 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAAAGT CAAACATTGC TAAATTCGCC CTACCCCTGC TAATGATTTC AATGCTAGCA GCCTGTGGTA AGGAAGAAGT GGCCAAAAAA GAAGAAAAAT ATGCCATTCC CGTCGAAACC ACCACAGTGA TGCAAGGAAA CGTTTCATCT TTCTACAGCA CAACAGCCAC CTTAGAAGCA CCTCAAGAAG CCAATGTCGT CAGCCGCATT TCTGGACTCA TTGAATCACT TGCCGTTGAA GAAGGTGACC GCGTACAAAA GGGCCAAGTG CTCGCCGTTA TCGATGCCAA AAGACAGCAA TACGATTTAG ACCGCTCAGA AGCCGAAGTT AAAATCATTG AGCAGGAATT GAATCGTCTG AAGAAAATGG GCAACAAAGA ATTTATCAGC GCAGATTCGA TGGCCAAACT TGAGTATAAC TTGCAAGCCG CCATCGCCAA GAAAGATCTT GCCGAGCTAC AAGTCAGAGA AAGCCGCGTA CTATCCCCTA TTAGCGGCGT CGTCGCTAAA CGTTATGTGA AAGCAGGCAA CATGGCGAAG GAATTTGGCG ACTTGTTCTA CATAGTCAAT CAAGATGAAC TCCACGGTAT AGTCCATCTG CCAGAGCAAC AACTTGCCAG CTTAAGACTC GGCCAAGAAG CACAAGTGTT CAGCAATCAA CAAAGTAAAA ATGCTATCCA TGCCAAAGTG CTGCGGATAA GCCCGATTGT TGACCCACAA AGTGGCACGT TTAAAGTGAC ATTAGCCGTA CCGAATCAAG AGGCGCGCCT AAAAGCAGGG ATGTTTACCC GTGTAGAGCT TAAGTATGAC ACCCATGAAA ACGTGATTAC CGTTCCCTAT AGCGCCCTGA TTAACCAAGA TAACAGGCAA GCTTTGTATG TTATCGATGG CACTAATGCT AACCGCCGTG AAGTCGAAAT TGGCTATCGT GAAGGTGACT CTGTAGAAGT GATTGCAGGC ATTAACCCAG GTGAACAAGT CGTGACCCGT GGCCAGCAAA ACTTGAAAGA CCAATCCTTA GTCGAAGTGA TCACCCCACT CGATCTTGCT TCCGCTAAGA ACTGA
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Protein sequence | MEKSNIAKFA LPLLMISMLA ACGKEEVAKK EEKYAIPVET TTVMQGNVSS FYSTTATLEA PQEANVVSRI SGLIESLAVE EGDRVQKGQV LAVIDAKRQQ YDLDRSEAEV KIIEQELNRL KKMGNKEFIS ADSMAKLEYN LQAAIAKKDL AELQVRESRV LSPISGVVAK RYVKAGNMAK EFGDLFYIVN QDELHGIVHL PEQQLASLRL GQEAQVFSNQ QSKNAIHAKV LRISPIVDPQ SGTFKVTLAV PNQEARLKAG MFTRVELKYD THENVITVPY SALINQDNRQ ALYVIDGTNA NRREVEIGYR EGDSVEVIAG INPGEQVVTR GQQNLKDQSL VEVITPLDLA SAKN
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