Gene Sbal223_1819 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal223_1819 
Symbol 
ID7086493 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS223 
KingdomBacteria 
Replicon accessionNC_011663 
Strand
Start bp2145547 
End bp2146419 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content48% 
IMG OID643460723 
Productisocitrate dehydrogenase (NADP(+)) 
Protein accessionYP_002357747 
Protein GI217972996 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0201346 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.303946 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACTGT TTGTCAAAGA TTTAACTGTG ATCGATTTTT CCTATTTGTG CCCAAAGCGC 
GGCATGGTGG GAGAGAGTTG GATTGTCGAT GTTCTGCTTG AGGGCGGATT AGACGAGCAA
AATATGGTGC TCGATTTTGC TAAGGTGAAA CGCACCATCA AGCAGACCAT AGATGCGGTG
GCCGATCATC GTTTACTTGT GCCTACGGCG TGCAGCAGTG TGCGTTGGCA GCAACAGGGC
GATAGAGTGT GGATGGATTT TGATAGCCAG TTAGGTGAAA TCCATTTGGC CTGTCCTTCC
CAAGCCTTTG CCTTAGTGCC GACCGAACAA ATTGATATTC CAAGCGTGAA TGCTTTTTTA
CAGAAAGCGT TACGCGAAGC CTTACCTAAG AATGTCGAAG GGATCACGCT CACCTTGAGA
CATGAAATCC TCGATACGCC TTATTATCAT TACAGCCATG GTTTACGTAA ACACGATGGT
AATTGCCAGC GTATCGCCCA TGGACATCGT AGCCCAATTC ATGTGTTTGA GAATGGCAGT
CCAGCACCAA AGTGGGATGA GTATTGGGCC AAGCGCTGGC ACGATATTTA TTTAGGCAGT
GAAGAGGATT TGGTTTCTGT TGACACCCTG AATTTATCGT CGCAAACGCG GATCACCGAC
GACAGTCATT ATGGTTTCCA TTACCAAGCG CCCCAAGGGG ATTTCCAATT GGCGATGCCA
AAGGAAGGCT GTGATTTAAT TCCCCACGAC ACGACGGTTG AGTTGTTAGC CGACTATATT
GCCACGACAC TCGTCGCTAA AGTGCCCGGA AGTCAGTTTA AAGTGGTGGC ATTTGAAGGT
GTCGGTAAAG GCGCGATTGT GTCTAAGGGA TAA
 
Protein sequence
MQLFVKDLTV IDFSYLCPKR GMVGESWIVD VLLEGGLDEQ NMVLDFAKVK RTIKQTIDAV 
ADHRLLVPTA CSSVRWQQQG DRVWMDFDSQ LGEIHLACPS QAFALVPTEQ IDIPSVNAFL
QKALREALPK NVEGITLTLR HEILDTPYYH YSHGLRKHDG NCQRIAHGHR SPIHVFENGS
PAPKWDEYWA KRWHDIYLGS EEDLVSVDTL NLSSQTRITD DSHYGFHYQA PQGDFQLAMP
KEGCDLIPHD TTVELLADYI ATTLVAKVPG SQFKVVAFEG VGKGAIVSKG