| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_1818 |
|---|
| Symbol | |
|---|
| ID | 7086492 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS223 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011663 |
|---|
| Strand | - |
|---|
| Start bp | 2143769 |
|---|
| End bp | 2144803 |
|---|
| Gene Length | 1035 bp |
|---|
| Protein Length | 344 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 643460722 |
|---|
| Product | Cytochrome-c peroxidase |
|---|
| Protein accession | YP_002357746 |
|---|
| Protein GI | 217972995 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1858] Cytochrome c peroxidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.680331 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.132089 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCAAAC TCACATCTAT TGCTATTTTC ATTGCGGGTA TTTTCGCCAG TGCCCATGCC
ATCAGTGCTG AACCCATCGA AGTGATAAAA GCGGTGAAAG TTACCGAACC GGAGAAAGTT
GAACTCGGTA AAATGCTGTT CTTCGAACCA AGGCTATCCA AATCGGGCTA CATCTCCTGT
AACTCTTGCC ACAATTTAGC CACTGGCGGA GTCGATGCCC TACCAACCTC TGTTGGCCAT
AATTGGCAAC AAGGCCCGAT TAACTCGCCC ACAGTGCTCA ATGCCAATTA TATGCTGGCG
CAATTTTGGG ATGGCCGCGC CAGTGATTTA CAAGCGCAAG CCGCTGGCCC TATCGAGAAT
CCGAAGGAAA TGGGCTATAG CCATGCACTC GCGACACAAA CTATTGCCTC TATGCCTGCC
TATCGGGCGC ATTTTGCCAA AGTCTATGGC GATGAAAACG TCACGATTGA TCGCTTAACC
GATGCGATTT CCACCTTTGA AAAAACCTTA GTCACGCCAA ATAGTCCGTT CGATCAATAT
TTATTGGGCA AGCAAGATGC GATCAGTGTG GATGCCAAAG CGGGTTACCA ACTGTTTAAG
AGCAAAGGGT GTGTAAGCTG CCATAACGGT CCAGCCGTCG GTGGCACTAT GTATATGAAG
ATGGGGTTGA TTAAACCTTT CCACACCAAT AATCCCGCCG AAGGTCGTAT CGCAGTCACA
GGTAAAGAAG CCGATAAGTT TGTCTTTAAA GTGCCGACAC TGCGCAATAT TGAACTCACC
TATCCCTACT TCCACGACGG CAGTGTCTGG ACCTTAGAAG AAGCGGTGAA CACTATGGCC
GATATTCAAT TAGGCCAAAA ACTGTCGGAC AAAGAAAATC TAGAAATGGT CGCCTTTCTC
GTCTCGTTGA CGGGGGATCA ACCTCAGATC ACCTTGCCGA TTTTGCCGCC ATCCAACAAG
AACACACCGC GACCAGTGCC TTTTAGCCAT GATCCAATGA GTAGTAAGCC AGTTAGCAGT
GAGCTATTAA AGTAG
|
|---|
| Protein sequence | MTKLTSIAIF IAGIFASAHA ISAEPIEVIK AVKVTEPEKV ELGKMLFFEP RLSKSGYISC
NSCHNLATGG VDALPTSVGH NWQQGPINSP TVLNANYMLA QFWDGRASDL QAQAAGPIEN
PKEMGYSHAL ATQTIASMPA YRAHFAKVYG DENVTIDRLT DAISTFEKTL VTPNSPFDQY
LLGKQDAISV DAKAGYQLFK SKGCVSCHNG PAVGGTMYMK MGLIKPFHTN NPAEGRIAVT
GKEADKFVFK VPTLRNIELT YPYFHDGSVW TLEEAVNTMA DIQLGQKLSD KENLEMVAFL
VSLTGDQPQI TLPILPPSNK NTPRPVPFSH DPMSSKPVSS ELLK
|
|---|
| |