| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_1812 |
|---|
| Symbol | |
|---|
| ID | 7086486 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS223 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011663 |
|---|
| Strand | + |
|---|
| Start bp | 2137265 |
|---|
| End bp | 2137861 |
|---|
| Gene Length | 597 bp |
|---|
| Protein Length | 198 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 643460716 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002357740 |
|---|
| Protein GI | 217972989 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1901] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.00771142 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.0163306 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCGCGT TTGTTTTAAG AGCAAGATCA GCACCTACTG ACAGTCAGTT GTTTTTGGCT
TCTGTCGGCC AAGAGGCGCA CACCGAGATT TTGGCTCATA CCCTAATGAA CACTATCTTT
GTGGCTCAGT CCCATCGAAA CGATGTTGTC GTTTATCTAG TGTTAGAAAG TACCCATGAT
TTTTCCCGCA CTATTTGCTT TGATACCCGA AATATTTGCC ATATTGGCGG TTTTCACGAA
CAAGCTTTGC TGACGAAAAT TGCCAAGGCC TTAGATATTT CTCGGGGCAT GACGAAAGAG
CAAACTCGCG TTGTGGATGA GGGCATAACT GTGAGCACCA TCAGTTTTGA AAAGCTGGTG
CAGGACCTCG CGGTGGATTA TCAATTGTTT ATGATGGATA AGAAGGGCAC TTCTATCCGT
GAGCAGGAGT TTGTGGGTAA TCCGTGCTTT TTGCTGACCG ATCATATTCC TATGCCGAAG
AAAAGTTTTA ATACCTTGAA ACGACTCGGT GCGCAAAAGA TCAGCCTTGG GCCTAAGATG
CTGTTTGCTT CCCAGTGCGT GGTATTGATC CATAATGAAT TGGATATCAA TCAGTAG
|
|---|
| Protein sequence | MRAFVLRARS APTDSQLFLA SVGQEAHTEI LAHTLMNTIF VAQSHRNDVV VYLVLESTHD
FSRTICFDTR NICHIGGFHE QALLTKIAKA LDISRGMTKE QTRVVDEGIT VSTISFEKLV
QDLAVDYQLF MMDKKGTSIR EQEFVGNPCF LLTDHIPMPK KSFNTLKRLG AQKISLGPKM
LFASQCVVLI HNELDINQ
|
|---|
| |