| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_1799 |
|---|
| Symbol | |
|---|
| ID | 7088333 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS223 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011663 |
|---|
| Strand | + |
|---|
| Start bp | 2120131 |
|---|
| End bp | 2120994 |
|---|
| Gene Length | 864 bp |
|---|
| Protein Length | 287 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 643460703 |
|---|
| Product | Thioredoxin domain protein |
|---|
| Protein accession | YP_002357727 |
|---|
| Protein GI | 217972976 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG3118] Thioredoxin domain-containing protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.635888 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.000000415158 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGACAATA TCCTCAGCCT GACTAAAGAC AATATTCAGC AAGTGGTTGA TGCCTCGATG
CAGCAGATCG TGGTATTAGC ATTTTGGGCA CAGCCGCAGG AACAAAGTGT GGCTATGCTG
CACACCTTAG AGCAAATTGC CGCGCAAAAT GCGGGTCGAT TCGTTCTCGC TAAAGTTGAC
TGTGAAGCAG AATTAGAAAT TGCCAATTAC TTTCGCATTC AAAGTCTACC GACCACGTTA
GTATTGGATA AAGGTCAGCC TGTCGATGGT TTTGCTGGCC TGCAAGATGC GGCGCAAGTT
ACAGCCATGC TGGATAAACA TTTGCCGCCT ATGTGGCAGT TACAGTTAGC ACAGGCCAAA
GCATTACTCG CCCTTAGTCA AGTGAGCGCA GAGGATCTTG CCACTGCTGC CGTGTTGCTT
AAAGACGCGC ATGCAGGCTC AAATCAAGCG GGTGAGGTGA GTTTAGTACT CGCCGATGTG
TATCTGATGC AGGGCGAATT AGTGTTAGCG CAAGCCATGC TTGAGAAGGT AGGGCTTGCT
GACCAAGACG GTTACTACCA GAGTTTAAAA GCTAAGCTCG CACTTGCCCT AGATGCGGCG
GATACCCCTG AAATTCGCGA TTTGCAGCAA AAGTTTGAGC AAAATCCAAC AGATTTAGTG
TTATTACTCG AACTGAGTAA GGCATTGCAT GCCGCCCACC GCGATGATGA AGCATTAGAT
CTGTTATTCG GTGTGCTCAG TAAAGATTTA GGTGCTGAAA ATGGCACAGT AAAACAAGTG
TTTATGGAAG TATTAACGGC ACTTGGTCAA GGTAATCCCA TCGCTAATCA ATACCGCCGT
AAACTCTATA CTTTGCTCTA TTAA
|
|---|
| Protein sequence | MDNILSLTKD NIQQVVDASM QQIVVLAFWA QPQEQSVAML HTLEQIAAQN AGRFVLAKVD
CEAELEIANY FRIQSLPTTL VLDKGQPVDG FAGLQDAAQV TAMLDKHLPP MWQLQLAQAK
ALLALSQVSA EDLATAAVLL KDAHAGSNQA GEVSLVLADV YLMQGELVLA QAMLEKVGLA
DQDGYYQSLK AKLALALDAA DTPEIRDLQQ KFEQNPTDLV LLLELSKALH AAHRDDEALD
LLFGVLSKDL GAENGTVKQV FMEVLTALGQ GNPIANQYRR KLYTLLY
|
|---|
| |