| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_1796 |
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| Symbol | |
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| ID | 7088330 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS223 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011663 |
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| Strand | + |
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| Start bp | 2113466 |
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| End bp | 2114548 |
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| Gene Length | 1083 bp |
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| Protein Length | 360 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 643460700 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_002357724 |
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| Protein GI | 217972973 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00000436323 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00000011193 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAAAAAA TTATTCTAAT AATCGCCCTA TTGGCCGCGG CATGGTTTGG ATATCAAGCC
ATGCAACCGC AAGAGATTGC CACCGCGCAA ATGAAACTCA TGCCTAACGT AGTGATTGCC
ACTGCTGCCA TGGCACCTAT TCGTGATGAA GTGGAAGCCA TCGGCACCAA TAAAGCCGCA
GAATCTGTGA CCATAACCCC TAAAGTTACC GACATGGTGA TAGCACTTAA GTTTGATGAT
GGCGACATAG TCAAAAAGGG CGACTTGTTA GTCCAACTGC AAAATGCTGA GCAGATCGCT
AAGGTTAAAG CCGCGCAAGT CAAAGTCAGT GATAATCAAC GTGAATTCAA CCGTATCAGT
TCGTTAGTCA CCAGCCGCAC TGTGGCAGAG TTAGAACGCG ACAGATTACA AACCCTTATC
GATACCACCC GCGCAGAGCT TGAACAGGCG CAAGCATCAC TCAATGATCG CAGTATTCTG
GCGCCTTTTA ATGGCCGTTT AGGTTTACGC CAAATCAGTG TCGGTAGCCT AGTATCGCCC
GGCACTGCGA TCACTACCTT GGATGATATC TCTAAGATTA AACTCGATTT TTCAGTGCCT
GAGCGTTTTA TTCAAGATTT AGCCCCAGGT AAGAAAGTTG AAGCTAAAGC CGTGGCCTTT
CCTGATTTTA CCTTCAAAGG CGTGGTGACA TCGATTGATA GCCGCGTAAA CCCAACGACG
CGCACTGTGA TTGTCCGCGC CGAAATCCCT AATCCTGAGC TGCGTTTATT ACCGGGCATG
TTGATGAAGG TCAAACTCAT CAAACGTAGC CGTGAAGCCT TGATGTTGCC AGAATCTGCC
ATTATCCCAA TCCAAAATGA TCACTTTGTT TACAGCGTTA ATGCCGATAA TGTGATTGAG
CGTAAACAAG TCACTATCGG GATTCGTACC CGTGGTTGGG TGGAAATCTT AGACGGTTTA
GCTTTGGGTG AAAACGTGGT GATCCGTGGC TTATTGAAAG TCCATCCTGG GGATAAAGTG
CAAACGGAGT TCGCGGAAAA GTTTAGTTAT CTTGCGGATA CGAGCGCGGA GCCAAGTGTA
TGA
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| Protein sequence | MKKIILIIAL LAAAWFGYQA MQPQEIATAQ MKLMPNVVIA TAAMAPIRDE VEAIGTNKAA
ESVTITPKVT DMVIALKFDD GDIVKKGDLL VQLQNAEQIA KVKAAQVKVS DNQREFNRIS
SLVTSRTVAE LERDRLQTLI DTTRAELEQA QASLNDRSIL APFNGRLGLR QISVGSLVSP
GTAITTLDDI SKIKLDFSVP ERFIQDLAPG KKVEAKAVAF PDFTFKGVVT SIDSRVNPTT
RTVIVRAEIP NPELRLLPGM LMKVKLIKRS REALMLPESA IIPIQNDHFV YSVNADNVIE
RKQVTIGIRT RGWVEILDGL ALGENVVIRG LLKVHPGDKV QTEFAEKFSY LADTSAEPSV
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