| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_1785 |
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| Symbol | mdoD |
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| ID | 7088319 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS223 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011663 |
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| Strand | - |
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| Start bp | 2102443 |
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| End bp | 2104038 |
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| Gene Length | 1596 bp |
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| Protein Length | 531 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 643460689 |
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| Product | glucan biosynthesis protein D |
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| Protein accession | YP_002357713 |
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| Protein GI | 217972962 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3131] Periplasmic glucans biosynthesis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000307117 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.00000000192926 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | TTGCGAATGA ATCATACGAT GAATTACCCT ACCGGTTATC CGGCATTACT CAAAAAACTA
CCTTTTTTCA TCTTGACCGC CATCGTCTAC GTCGTCGGCA TGAATAACGT CAATGCCGCA
GCGGCAGAGA CAACCGCAGC ACCTGCGCCT GTACCAGAAA AAAAATCTAA AAATTTTACC
CACGATACTG TAGTCGAACT CGCGCAACAA CTGTCGCAAA AACCATTTAA AGAAGCCAAG
AAAGCGCCTC AAGAACTAAT CGATCTTGAT TTTGCCACCT ATGGCAAAAT CAATTATCAA
GAAAATGCCG CGATTTGGGG CGGTACACCC ACTAAATTTT CAGTACAGCT TTTTGCTCCG
GGTTTTCTCT ATAAAAACCT CGTCGACATC GATGTGGTCG AAAACAGCAA AGCGATACCG
ATTGAACTCA CTGAGGCCTC GTTCGATGTG CCCAGTGACG CCATCGAAAA ACTCATCACC
CAATTGGGTC AATATGCTGG CGTGCGTTTG CATTACCCCA TCAATGACGA TGAAGTAAAA
GATGAATTCA TCATGTTTCA AGGCGCAAGC TATTTTCGCG TGCTGTCTAA AGGGCAAACC
TATGGCCTGT CTAATCGCGG TTTAGCGATA GATGTCGCCC AGCCTAAAGG CGAAGAATAT
CCATTGTTTA AGCGTTTTTG GGTTGAACGA CCATCCAAAT ACCAAACGGC GATTGTGGTG
CATGCCCTGC TCGACAGCCA AAGTGTCACG GGTGCCTACC GTTTTGGTAT TTACCCTGGC
GCACCATCAC GTGTCGAAGT GGATGTAACC CTGTTCCCAC GCAAAGATAT TCAACATGTT
GGCCTTGCAC CGCTGACCTC TATGTTCCTA TTTGGTGGAT TAGATAACTC GGATAAACCC
GATTACCGCC CTGAAGTACA CAACTCAGAC GGCTTGCAAA TCGATCGCGG TAATGGCGAG
CGTCTATGGC GCCCCTTAAA CAATCCAAAC AAACTACAAG TCAGCGCCTT TGCCGATGAA
GATATTAAAG GTTTTGGTCT GATCCAGCGC CATCGTAAGT TTGAAGACTA TCAAGATCTG
AGTGCAAACT ATCAACTTCG CCCTTCAGCG TGGATTGAGC CACTCAATGA TTGGGGCAAG
GGTCAGCTGG TGTTGATTGA AATCCCATCG AGTGCAGAAA CCAACGACAA CATAGTCACT
TATTGGGAGC CACAAGGCGG CCTGAAGAAA GATCAACCCT ATAAATATTC CTATCGTATG
ACGGCGTCAA ACGACAGCCC TTCAATCGCG TCAAAGGCAC GAGTGGTCCG CAGTTCGAAG
GGGCAAGTGC TCAGCAAGGG TAAAGAGTTA CTCGTCGACT TTAGTAATAT CAAGCCACAA
GATATTGATA AAATTAGTAT CGATGCCAGC ATCAACAAAG GCAAAATCCT GTCTACTCGG
ATTGTTGCCC ACCCTGACAT CAATGGTGCA CGGGTATTTG TCAGCTTCGA ACCAGAAAGC
ACCAATGTAG CCGAACTGAG ATTACAGTTG AAGAAAGACG ATAAACCCCT CGCAGCGACT
TGGTTATACC GCTGGAATAG CGACGATTGG CAATAG
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| Protein sequence | MRMNHTMNYP TGYPALLKKL PFFILTAIVY VVGMNNVNAA AAETTAAPAP VPEKKSKNFT
HDTVVELAQQ LSQKPFKEAK KAPQELIDLD FATYGKINYQ ENAAIWGGTP TKFSVQLFAP
GFLYKNLVDI DVVENSKAIP IELTEASFDV PSDAIEKLIT QLGQYAGVRL HYPINDDEVK
DEFIMFQGAS YFRVLSKGQT YGLSNRGLAI DVAQPKGEEY PLFKRFWVER PSKYQTAIVV
HALLDSQSVT GAYRFGIYPG APSRVEVDVT LFPRKDIQHV GLAPLTSMFL FGGLDNSDKP
DYRPEVHNSD GLQIDRGNGE RLWRPLNNPN KLQVSAFADE DIKGFGLIQR HRKFEDYQDL
SANYQLRPSA WIEPLNDWGK GQLVLIEIPS SAETNDNIVT YWEPQGGLKK DQPYKYSYRM
TASNDSPSIA SKARVVRSSK GQVLSKGKEL LVDFSNIKPQ DIDKISIDAS INKGKILSTR
IVAHPDINGA RVFVSFEPES TNVAELRLQL KKDDKPLAAT WLYRWNSDDW Q
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