Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_1741 |
Symbol | |
ID | 7088275 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | + |
Start bp | 2051991 |
End bp | 2052737 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 643460645 |
Product | conserved hypothetical ABC transporter protein |
Protein accession | YP_002357669 |
Protein GI | 217972918 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.497041 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.00104039 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGTTCGAT GGCGTTCAAT GCTCCTTGCG TGTTGCCTTT CCTCCATGGG ATTGAGCACA GCGAAAGCGG ATACCTTAAT GCTGACATCC TTACTTTGGC CGCCTTATTC TGGGCAGCAA TTAGCCGAGC AGGGCGCGAG TATTGCTGTG GCGCGGGCGG CGCTCAAAGT GATGGGGCAC CAATTAGAAG TGGATTTTTA CCCATGGAGC CGCGCTGTAA AGCTCGCCAG TATGCCTAAT TCTGACTATC TGGGTTATTT CCCTGAGTAT TACTTTGAGA CTGAAAAGTT TGTTTTTTCT AAATCGATTG GCGACGGTCC TTTGGGACTG GTGGAGCAAA AAGCCCATCC TGTGAGTTGG AATTATGTCG AAGATCTGAA TCGCTATACC TTAGGTGTGG TGAAAGATTA CGTGAATACT CAGGCGTTAG ATCGCATGAT TGCCACAGGC GTTCAGCCGA CTGAAGCGGT GACTTCAGAT GAGCACAATA TTAAGAAAGT GGCCGCAGGC CGTATTGATG CGGCGGTAAT CGATGTCAAC GTGCTGCACT ATTTACTTAA GCAAAAGCCC TTGCAGCCAT TGGCGGACAA ACTGCAAATC AACCGCCAAA TTTTAGCGAA TAAGCAGCTT TATATTGCGT TTCGTAATAC CGAAGAAGGC CGACGTTGGC GGGATATTTT TGATCAAGGC TTGGCGCAAA TTGATGTCGA AACCATCATC GGAGAGCTAC TGTATCGTGA AGACTAA
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Protein sequence | MVRWRSMLLA CCLSSMGLST AKADTLMLTS LLWPPYSGQQ LAEQGASIAV ARAALKVMGH QLEVDFYPWS RAVKLASMPN SDYLGYFPEY YFETEKFVFS KSIGDGPLGL VEQKAHPVSW NYVEDLNRYT LGVVKDYVNT QALDRMIATG VQPTEAVTSD EHNIKKVAAG RIDAAVIDVN VLHYLLKQKP LQPLADKLQI NRQILANKQL YIAFRNTEEG RRWRDIFDQG LAQIDVETII GELLYRED
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