Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_1733 |
Symbol | |
ID | 7088267 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | + |
Start bp | 2043962 |
End bp | 2044876 |
Gene Length | 915 bp |
Protein Length | 304 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 643460637 |
Product | transcriptional regulator, LysR family |
Protein accession | YP_002357661 |
Protein GI | 217972910 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.540209 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.00457022 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCGCATCG ATATTGATGC TTTTAATGTG CTGCAAGTGC TGGTGGAAGA GGGCAGTTTT GCCAAGGCGG CGGAGCGGTT ACACAAGGCG CAATCGGCGG TGAGTTATCA AGTTAAAAAG TTAGAAGAGC ACTTAGGCGT GCAGCTTTTT AGCCGTGAGC AATATCGTGC AGAGCTGACG CAAGAGGGCC GGGTGATTTT GGCCGAGGGG CGAAGATTGT TGCAACACCT TGCAAACATT GAACATCTTG CCAGCCGTTT CAGTGAAGGC TGGGAGCCAA AGCTAGAGCT AGTGATAGAT GGAGCCTTGC CGATGGAGCC AATTATGACG GCTTTAAAGC GTATGGCTGA ACATCAAATC CCCACAAAAA TTCAGCTCAA TATGGAATTT TTAGGCGGCG TACAACACAG ATTCGAGCGT GATAATGCCG ACTTGATGTT AGTGAAAGAT TATCGCACTG GCCCCTATTA TCATCCGCAA CCTTTGCCAG CCATCACCAG TGTGCTGGTG GCAAGTGCTT CGCATCCTTT GTCTTTTATT CGCGGAATTA GTTTGTCTGA ACTGCAGCAA CACGTGGAAT TGACTATCGA AGACTCTTCG CCCAATAAAA GTTACCGCGA TGAAATGCAA TTTGGCGGCG ATAAAGTGTT TTATCTTTCA GGCTTTATCA TGAAAAAGAA CGCCTTGTTA AAAGGCTTAG GTTTTGGTTG GTTGCCGGAC TTTCTAGCGC AAGAAGAGTT GGCGAAGGGG GAGTTAGTTG AAATCGACTT TGTCGGTGGC AGCCGTTTTA CCTTTATTCC ACAGCTTGTC TCGACCTTAG AGCGGCCGTT AGGCCGTGCG GGACAACTTT TTACCGAGTT GATATTAGAG GAGTTTGCGA AGGCTGAGCA GTTTAATGGC GTGGGGTTAG GTTGA
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Protein sequence | MRIDIDAFNV LQVLVEEGSF AKAAERLHKA QSAVSYQVKK LEEHLGVQLF SREQYRAELT QEGRVILAEG RRLLQHLANI EHLASRFSEG WEPKLELVID GALPMEPIMT ALKRMAEHQI PTKIQLNMEF LGGVQHRFER DNADLMLVKD YRTGPYYHPQ PLPAITSVLV ASASHPLSFI RGISLSELQQ HVELTIEDSS PNKSYRDEMQ FGGDKVFYLS GFIMKKNALL KGLGFGWLPD FLAQEELAKG ELVEIDFVGG SRFTFIPQLV STLERPLGRA GQLFTELILE EFAKAEQFNG VGLG
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