| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_1720 |
|---|
| Symbol | |
|---|
| ID | 7086329 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS223 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011663 |
|---|
| Strand | + |
|---|
| Start bp | 2025332 |
|---|
| End bp | 2027476 |
|---|
| Gene Length | 2145 bp |
|---|
| Protein Length | 714 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 643460624 |
|---|
| Product | Peptidyl-dipeptidase Dcp |
|---|
| Protein accession | YP_002357648 |
|---|
| Protein GI | 217972897 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0339] Zn-dependent oligopeptidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.159822 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.00025314 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCGTAAGT CCGTTATTAC CACAGCCGTG GCCGCGGCTT TGTTACTTGG CGCTTGTTCA
GACAAGCCAG CCGCAAGTGC CAATGAAGCC AAAAATGCCG TAGCGACTCA AAACGCTGCT
AAAGCGCAAG CAACCAATGT GTTGCTGAGC AAGAGTCCAC TGCAGGATCA AGCGCCACAA
TTTAACCTTA TCCATACGGC AGATTATGCT CCTGCCTTCG AGCAAGGCAT TAAAGCCCAT
GATGCTGAAA TCGCTGCCAT TGTGAATAAC AAGCAAGCAG CCAGTTTTGA CAACACCATT
CTGGCGATGG AAACCTCGGG TGAATTATTA ACGCGGGTGT CGCGGACCTT CTTTAATCTC
GCCGGTCTGA TTTCTGATGA TGATTTCCAG AAAACCGAAG CAGATCTTGC ACCTAAGCTA
TCTGCCCATC GCGATAATAT TTATCTCGAT CCGACGTTAT TTGCCCGTGT TGAAGCCGTA
TATCAACAAA AGAGCAGCTT AAATGCGGAA GATCAGCGTT TAGTTGAATA CTACTATGAG
CAGTTTGTTC GCGCTGGCGC GAAATTGTCG GCCGAAGATA AAGCTAAAAT GCGCGACTTT
AACGCCGAGC TTGCAACCTT AGCGACGGAC TTTTCACAAA ACAGCTTAAA ATCATTTAAA
GATGATGTGA TTGTTGTGAC TGATAAAGCC CAGTTAGCTG GTTTATCTGA CAGCGAAATC
GCCACCTTAG CCGCTGCCGC CAAAGCTGCT GGAAAAGAGG GCTATTTGAT TACCTTAGTG
AACACGACTC GCCAGCCTGT GCTTTCTAGC CTGAGCAACC GTGAACTGCG CCAAAAAGTG
TGGGAAACCT CGGCGCACAG AGCTGTTGCA ACTAATGGCC CATTGATTGT TAAAATGGCG
CAAATTCGGG CTAAAAAAGC TAACTTATTG GGATTCGATA CTTGGGCATC CTATGCGGTT
GCCGATCAAA TGGCGAAAAC CCCAGCCGCT GTGTATGAAA TCCTCGACGA TTTAGCACCA
AAAGCCTTAG CACGTGCCAA AGTGGAAGCG GCTGATATTC AAGCTGAAAT CAAAAAGGCG
GGCGGTGATT TCGAGCTTCA ACCTTGGGAT TGGGCTTATT ACGCCGACAA AGTGCGTAAA
GAGAAATACG ATCTCGACGA AAGCAGCATC AAACCTTATT TCGAGTTTAA TACTGTGCTG
CAAGACGGGC TGTTTTTCGC GATGCATAAA TTGTATGGCA TCAGCTTAAA AGCGCGTACC
GATTTACCCG TGTGGAATCC CGATGTCTTA GCCTTTGAAG TCTTCGATAA AGACAACAGC
TCTATTGGCT TATTCTACCT TGACCCTTAT GCCCGCGAAG GCAAAGGCGG CGGCGCGTGG
ATGGATGAGT TCGTCACCCA AAGCGGTCTG CTTGGCACTA AGCCCGTTGT TTATAACGCG
CTGAATATTC CTAAGCCAGC CGATGGCCCA ACGTTAATGA CCTTCGATGA AGTGACGACT
ATGTTCCATG AAATGGGTCA TGCGGTTCAC GGTTTATTCT CGCAGGTGAA ATACCCAAGC
GTGGCTGGCA CATCAACCGC ACGTGACTTT GTTGAGTTCC CATCCCAGGT TAACGAAGAT
TGGAATATCG ATCCTGCTGT GATTGCTAAC TATGCCAAAC ACTACAAGAC GGGTGAGCCA
ATTCCTAAGG CACTGCTTGA TAAAATCTTA GCCTCAAATA AGTTTGGCCA AGGTTTTGAT
ACCGTTGAGT ATCTGTCAGC TGCCTTGTTA GATATGGAAT GGCACTCTAT CAGCGCCGAT
AGTCAAATTA GCGATGTAGA GAAGTTTGAA CACCAAGTGT TAGCTAAACA CGGCCTCGAT
TTTGCGCCAA TACCACCGCG TTATAAGTCG AGCTACTTTA GCCATGCCTT CTCCGGTGGT
TATTCAGCTG GATATTACGC GTATTTGTGG ACCGAAGTGT TTGCCGCCGA TGCCTTTGCC
TACATGGGCG AGCACGGTGG ATTAAAAGCC GATAATGGTG ACAAATTCCG TAAGGAAGTC
TTATCTAAAG GTAACAGTGA AGATCTCATG CAAGATTACA TTCACTTTAC CGGTAAAAAG
CCGACAACCG ATGCACTGTT AAAGCGCCGC GGTTTAGTCG ACTAA
|
|---|
| Protein sequence | MRKSVITTAV AAALLLGACS DKPAASANEA KNAVATQNAA KAQATNVLLS KSPLQDQAPQ
FNLIHTADYA PAFEQGIKAH DAEIAAIVNN KQAASFDNTI LAMETSGELL TRVSRTFFNL
AGLISDDDFQ KTEADLAPKL SAHRDNIYLD PTLFARVEAV YQQKSSLNAE DQRLVEYYYE
QFVRAGAKLS AEDKAKMRDF NAELATLATD FSQNSLKSFK DDVIVVTDKA QLAGLSDSEI
ATLAAAAKAA GKEGYLITLV NTTRQPVLSS LSNRELRQKV WETSAHRAVA TNGPLIVKMA
QIRAKKANLL GFDTWASYAV ADQMAKTPAA VYEILDDLAP KALARAKVEA ADIQAEIKKA
GGDFELQPWD WAYYADKVRK EKYDLDESSI KPYFEFNTVL QDGLFFAMHK LYGISLKART
DLPVWNPDVL AFEVFDKDNS SIGLFYLDPY AREGKGGGAW MDEFVTQSGL LGTKPVVYNA
LNIPKPADGP TLMTFDEVTT MFHEMGHAVH GLFSQVKYPS VAGTSTARDF VEFPSQVNED
WNIDPAVIAN YAKHYKTGEP IPKALLDKIL ASNKFGQGFD TVEYLSAALL DMEWHSISAD
SQISDVEKFE HQVLAKHGLD FAPIPPRYKS SYFSHAFSGG YSAGYYAYLW TEVFAADAFA
YMGEHGGLKA DNGDKFRKEV LSKGNSEDLM QDYIHFTGKK PTTDALLKRR GLVD
|
|---|
| |