| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_1705 |
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| Symbol | |
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| ID | 7086311 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS223 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011663 |
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| Strand | + |
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| Start bp | 2000169 |
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| End bp | 2002226 |
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| Gene Length | 2058 bp |
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| Protein Length | 685 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 643460606 |
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| Product | DNA ligase, NAD-dependent |
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| Protein accession | YP_002357633 |
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| Protein GI | 217972882 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0272] NAD-dependent DNA ligase (contains BRCT domain type II) |
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| TIGRFAM ID | [TIGR00575] DNA ligase, NAD-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000114947 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.000000000204337 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGCAAGACA TTCAACTCGA TACACTTCTG TCTGAAGACG TTACCCCAGA AAACGCATCG
CAGGTGATGC AGGCGCTCAG CCAATCACTG AACGAGCACA ACATTCGTTA CTATGTGGAT
GATGCGCCGA GCATTACCGA TTCTGAGTAC GACAGGTTGA TGCAGCGTTT ACTCAAGCTT
GAGGCGTTAT ACCCCCATTT GATTGTGGCT GATTCACCGA CTCAAAGGGT GGGCGGATTG
GCGCTCGCCA AGTTTGATCA GATCACTCAT CTTAAGCCTA TGTTAAGTCT GGATAACGCC
TTCGATGAGG CTGATTTCAG TGCTTTCCAC AAACGTGTCA CCGATAAAGT CGGTGAGGTG
AGTTTTTGCT GCGAGCCTAA ACTTGATGGC CTTGCCGTGA GTATCTTGTA TCGCCATGGC
GTGCTTGAGC GCGCTGCGAC CCGCGGCGAT GGTTCAGTGG GTGAAGACAT CACTGAAAAC
GTTAAAACCA TTAAATCGAT ACCGCTTAAA TTGCGCGGTA ATGATTTCCC TGAACTCGTT
GAAGTGCGCG GCGAAGCCTT TATGCCTAAA GCCGCCTTTG AAGCGCTGAA CGACAGGGCG
CGCGCCAAGG ATGAAAAGCT CTTTGTTAAT CCGCGTAACG CTGCTGCCGG CAGCTTGCGA
CAACTCGACA GTAAAATTAC CGCCGCCCGC TCATTGGCTT TTTATGCCTA TGCGCTAGGG
GTTGTTGAGC CGGATTCCCA TCCGTTAGCT AAAACCCATT TCGAGCAGTT ACAGCAGCTT
AAATCGTGGG GCTTACCCGT TAGTAGCGAA ATCAAAGTCT GCGCTGAATT AAGCCAAGTC
TATGACTACT ATAAAGACAT TCTTACTCGT CGCAGCGATT TAGCCTTTGA AATCGATGGC
GTCGTGATGA AAGTTAACGA CATTGACCAG CAGCAACGTT TAGGTTTTGT GGCTAAATCT
CCCCGCTGGG CGATTGCCTA TAAATTCCCT GCACAGGAAG AAATGACTCT GCTCGAAGGG
GTTGATTTCC AAGTGGGCCG CACCGGCGCA GTGACGCCAG TGGCGCGCTT AAAGCCAGTG
TTTGTTGGTG GCGTGACGGT ATCGAATGCG ACGCTGCACA ATGCCAATGA AATTGCCCGC
TTAGGCATTA AAGTCGGTGA CACTGTGATC ATCCGCCGCG CTGGCGATGT GATCCCGCAA
ATTGTTGCCA TAGTGCCCGA AAGACGTCCT GAAACGGCGA CTGACATTGT ATTCCCGCAT
AATTGCCCTG TGTGTGGCAG TTTAGTCGAG CGTCTTGAAG GTGAGGCTGT AGCGCGCTGT
AGCGGTGGTT TATTCTGCGA AGCGCAGCGT AAAGAAGCGA TTAAGCATTT CGCATCCCGC
AAGGCTTTGG ATATCGATGG CATGGGCGAT AAAGTCGTCG AGCAATTGAT TGATAAAGAA
CTCGTCCAAA GTCCTGCTGA TCTGTTTAAG CTCACCGCCT CTATGATGAC TATGCTCGAC
CGCATGGGGA TGAAGTCGGC AACCAATTTA GCCGCGGCGA TTGAAGCGGC TAAAACCACA
ACACTTGCGC GTTTCTTATA TGCCTTGGGC ATTCGCGAAG TGGGCGAGGC GACTGCCGCA
AACCTTGCGG CGCACTTTGC CAGTTTAGAT GCGCTGCGGG TGGCAACTGT GGAGCAGTTA
ACTGAAGTGG AAGATGTTGG CGCCGTGGTG GCCCAGCATG TGGCGCACTT TTTTGCTCAG
CCGCATAACC TTGAGGTTAT CGATGCCTTA ATCGCTGCAG GTGTGCATTG GCCCGCCATT
GAAGCGCCAA GTGCAGAGGC GCAGCCGCTT AAAGGCCAAA CCTGGGTATT GACAGGGACC
TTAAATCAAC TCAATCGTAA CGATGCTAAA GCGCAGCTGC AGGCGCTGGG GGCAAAAGTT
GCTGGCAGTG TGTCGAAGAA TACTGATTGC TTAGTGGCAG GTGAGGCGGC AGGTTCCAAA
CTTGCGAAAG CGCAGGAGCT TGGCGTTAAA GTGATGGATG AGGATGAGTT ATTGGCACTC
CTCGCCGCGA ACGCTTGA
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| Protein sequence | MQDIQLDTLL SEDVTPENAS QVMQALSQSL NEHNIRYYVD DAPSITDSEY DRLMQRLLKL
EALYPHLIVA DSPTQRVGGL ALAKFDQITH LKPMLSLDNA FDEADFSAFH KRVTDKVGEV
SFCCEPKLDG LAVSILYRHG VLERAATRGD GSVGEDITEN VKTIKSIPLK LRGNDFPELV
EVRGEAFMPK AAFEALNDRA RAKDEKLFVN PRNAAAGSLR QLDSKITAAR SLAFYAYALG
VVEPDSHPLA KTHFEQLQQL KSWGLPVSSE IKVCAELSQV YDYYKDILTR RSDLAFEIDG
VVMKVNDIDQ QQRLGFVAKS PRWAIAYKFP AQEEMTLLEG VDFQVGRTGA VTPVARLKPV
FVGGVTVSNA TLHNANEIAR LGIKVGDTVI IRRAGDVIPQ IVAIVPERRP ETATDIVFPH
NCPVCGSLVE RLEGEAVARC SGGLFCEAQR KEAIKHFASR KALDIDGMGD KVVEQLIDKE
LVQSPADLFK LTASMMTMLD RMGMKSATNL AAAIEAAKTT TLARFLYALG IREVGEATAA
NLAAHFASLD ALRVATVEQL TEVEDVGAVV AQHVAHFFAQ PHNLEVIDAL IAAGVHWPAI
EAPSAEAQPL KGQTWVLTGT LNQLNRNDAK AQLQALGAKV AGSVSKNTDC LVAGEAAGSK
LAKAQELGVK VMDEDELLAL LAANA
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