Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_1696 |
Symbol | |
ID | 7086302 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | - |
Start bp | 1984867 |
End bp | 1987641 |
Gene Length | 2775 bp |
Protein Length | 924 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 643460597 |
Product | TonB-dependent receptor |
Protein accession | YP_002357624 |
Protein GI | 217972873 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG4206] Outer membrane cobalamin receptor protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.438223 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.000325998 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCGCGCAA ATTCTACATT AGCCAAAGCT GTTCGCTTTG CGTTAATAGG TGGAGCTACT ACAGCTGCTT TATCAACGTC AGCTGTATTT GCTGCTGAAG ACGGTGCAAA AGTAGAACGT ATTGCTGTAA CAGGTTCTCG CATTCAAAGA ACCAATTTAG AAACATCTAC ACCTATAACG ATGTTTTCTG CAGCAGACAT AGAAAAAACA GGCTTTTCTA CCGTTTCTGA GTTTTTAAGA ACGAATGCAG CCTCTGGTGG TTTCAATGAA TCATCAACTT TAAGCCAAGC CGCTGGTGCG TCATCGATTG GTGTAAAAGG ATTTGGTTCC GATTATACAC TTATTTTATT GAACGGCCGT CGCATAGCAA AGAATACCGC AGGCGGCATT TTTACTGACG TAAACCAAGT GCCTATGGCA GCAGTTGAGC GAATCGACAT CCTTAATGAT GGTGCTTCTG CAATTTATGG TTCTGATGCG GTTGCTGGTG TAATAAACAT TATTACTAAG AAAGAATTTG ATGGCGTCGC ATTGAGTGCC AAATATGGCG GTGCGACAAA TAAGTGGGAT GGTAATGAAT TATCAGCATC AATTGTTACC GGTACAAGTA ACGAGAAAAC CAGTATCCTA TTCTCTGCAG AACATTTCGC TCGAGATGTA ATTCAAGCAT CTGATCGTGA ATTTGGTCGT ACAGCATTGA TAGAAGGTCA CGAAGGTGGG GATGGAAGAT CAACTTGGGG AATTCCTGGT TTTACTTCAA TAAGTTCTGC AAAAGGTTTC ACAAATGCTG CGACTGACGA AGGGTCTAAA CCTTGGTCAA ACTGCCCTGC AGGTGATGTC TTATCAAGTG GTCGTTGTGC TTACGATTTT GCACATTTAT ATCAACTTCA GCCAGAGTCT GAACGCCAGT CAATCTTTAC TACCATTAAT CATGAGATGA ATGATGACCT GACGTTTAAT GGTCAATTCC GTTACACTCG TGCTTATACT AAGACCTCGA ATGCCCCGGC CCCAGGTCAA GTAGATGTAT CCAACAGCCC ATTCCTAGCG GATTTTTTAC GTAATGACCG TTATAAAGAT GACCAAGCAA AAGCAGAAGA AATTATTCGT TTAGTTGAAG CGGGTGAAGC CAATGTTAGC GTCGGCCGCC GTTACCTTGA TTTCGGAAAT CGTGAAAAAG ACAACACAAA TGAAACATTC GAAGCAGTAG GTGGTGCAAA CTACAACATC GACGACAATT GGGGTCTAAA CTTTGATATT GGTTTTTCTC GTTTAACCAA CCGTCAAATT GGTTCATCTG GTCAATTATT GTCAGAAGAA GTCGCCAATG CATTCAATGA CCCTAAGTCA AAACTGAATC CATTCGTTAT TAATGACTGT AGTTCAAAAG ATTTATCTGA TACATGCCGA GATCTACAAG TAGCCATTCA TCGTACGGGT GAATATACAG TCTCTTTCTC TTCTCTTGTC TTATCAGGAC TGCTCCCTGG TATTGAATTA CCTGGTGGTG AAATTGGCCT AGCGACGGGT TTAGACATGC GCGAAGAAAA ATATACCGAT CGTTCAGATC CTGCAACCGT AGGTGGTCAA GTTATCGGTG GTGCAGGTTC AAATGGCGGT GGTCAATTCA GTAATCTTGC CGGTTTCATA GAACTTTCAT TACCTGTACT TGATAATCTA GAAGTAAGCC TAGCTGCTAG ACAAGACAAA GCAGATTGGG AGCTAGCTGA TGCGAGTGAT ACGACTTATT CAGCCAAACT ATCATATCGT CCTATTGATG ACTTATTGCT ACGGGCATCA TATGGTACAG GCTTTAAAGC TCCAAACCTA AGCGATTTGT TCCTAGCCGA ATCGTCTGGC GTCACTAGAG CCATTGATAC TAAACTGTGT AATGCTGCAG GTAATGTTCA AAACCACCCT GATTGTCAAC GCCAAGAGTT AAACTCGAAA AGTGGCGGCA ACCCAGATTT AACACCAGAA AAATCAAAGT CTTATAACCT TGGCGCAGTT TATCAGTTTA CAGATAATTT ATCACTATCT GTCGATTTCT GGTCACTTAA AATAGATGAC GTTGTAGGTA GCCTTGCTAT TCAAGAAATT CTGGATGAAG AAGCAAAAGG TAATTTGACT AACTTAGTCG TGCGTAACTC TGAAGGCCGT CTAACTGACT CTAACAGAGA CGGTTATGTT CAAACTAACA AACAAAACCT GACAGAGCAG AGTGCAACTG GCTTAAACTA TGATCTTCAA TATAGCAGTG AATTCTCATT TGGTACTTTG AAGTCAAGCT TACAAGCAGA ACAGTTCCTA AGCTATAAAA CGCAATCTTC AGCAGTACAA CCTTTATGTG ATGATATTGC TGATAATTCA ATGCGTGACT ATCGTATTAA CGGCAGCATT TCATTAGAAC AAAATGATTT TGTAACCTCA CTTAATATGC GTTACCTCCC TGGGTACGAA ATGTATGATA AGCGTAATAC AGGTAACAAG TCTTGCCAAT TGGTTGGTTA CTATGATGTT GGCAAGGCTA CAGATGTCGA TGCAAATGGT GATTTAGTGA ACCCAGGCAG AAGTCAACAT GTGGCAGCTT ATGTACAGTT TGATTTAACA ACAGCTTACT ATTTTGCTGA TGATAACAAA GTCACCTTAG GGGTCCGTAA CTTACTGGAT AGACAGCCAT CATTCAGCGC ACCAAACAAC TGGCCTTTCT ATGATCAAGG TGTCTATGAC AATATCGGCC GCTTCGTTTA TCTACAATAT GATGTGAAGT TCTAA
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Protein sequence | MRANSTLAKA VRFALIGGAT TAALSTSAVF AAEDGAKVER IAVTGSRIQR TNLETSTPIT MFSAADIEKT GFSTVSEFLR TNAASGGFNE SSTLSQAAGA SSIGVKGFGS DYTLILLNGR RIAKNTAGGI FTDVNQVPMA AVERIDILND GASAIYGSDA VAGVINIITK KEFDGVALSA KYGGATNKWD GNELSASIVT GTSNEKTSIL FSAEHFARDV IQASDREFGR TALIEGHEGG DGRSTWGIPG FTSISSAKGF TNAATDEGSK PWSNCPAGDV LSSGRCAYDF AHLYQLQPES ERQSIFTTIN HEMNDDLTFN GQFRYTRAYT KTSNAPAPGQ VDVSNSPFLA DFLRNDRYKD DQAKAEEIIR LVEAGEANVS VGRRYLDFGN REKDNTNETF EAVGGANYNI DDNWGLNFDI GFSRLTNRQI GSSGQLLSEE VANAFNDPKS KLNPFVINDC SSKDLSDTCR DLQVAIHRTG EYTVSFSSLV LSGLLPGIEL PGGEIGLATG LDMREEKYTD RSDPATVGGQ VIGGAGSNGG GQFSNLAGFI ELSLPVLDNL EVSLAARQDK ADWELADASD TTYSAKLSYR PIDDLLLRAS YGTGFKAPNL SDLFLAESSG VTRAIDTKLC NAAGNVQNHP DCQRQELNSK SGGNPDLTPE KSKSYNLGAV YQFTDNLSLS VDFWSLKIDD VVGSLAIQEI LDEEAKGNLT NLVVRNSEGR LTDSNRDGYV QTNKQNLTEQ SATGLNYDLQ YSSEFSFGTL KSSLQAEQFL SYKTQSSAVQ PLCDDIADNS MRDYRINGSI SLEQNDFVTS LNMRYLPGYE MYDKRNTGNK SCQLVGYYDV GKATDVDANG DLVNPGRSQH VAAYVQFDLT TAYYFADDNK VTLGVRNLLD RQPSFSAPNN WPFYDQGVYD NIGRFVYLQY DVKF
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