| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_1685 |
|---|
| Symbol | |
|---|
| ID | 7086291 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS223 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011663 |
|---|
| Strand | + |
|---|
| Start bp | 1971221 |
|---|
| End bp | 1972330 |
|---|
| Gene Length | 1110 bp |
|---|
| Protein Length | 369 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 643460586 |
|---|
| Product | protein of unknown function UPF0118 |
|---|
| Protein accession | YP_002357613 |
|---|
| Protein GI | 217972862 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0628] Predicted permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0357703 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.026776 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGCGAC CTAATGCGCC CTCCGCTGCT TACCGTGGCT TTGCGGTTAT GGCCTTTGTA
GTGATTATTT TGGCTGGGAT TAAGGCGGCG AGCCCGATTG TGGTGCCGTT TGTGCTGTCC
AGTTTTCTGG CGGTGATTTG TAATCCCGCG ATTGGTTTAA TGACAAAATT CCGTGTGCCT
AAATGGCTTG CGGTGATCCT CTTGATGGGC TTTATTGTGT TGATGGGCCT CTGGTTAGCC
TCGGTTGTCG GCAGTTCAGT CAATGAGTTC TCCAAACAAT TGCCCCAATA TCGTGTGCAG
TTAGTCGAGC AATTTGCTTG GATATTAAAT AAGTTACATT CCTTCAATAT TCAGATTTCG
AAGGATCAAG TGTTAGCGTA TTTTGACCCT GGCATGGCCT TGTCTATGAC CACTAATATG
CTGTCGGGTG TCGGCAATGT GATGGCGAAT TTATTTCTGA TCATCTTAAC CATCGTCTTT
ATGCTGTTTG AAGCACAATC GTTACCAAAG AAATTGCATC TGGCGCTGGA CGATCCCGAT
ATGCGCCTCA AGCAGATTGA CCGCTTTTTG CAATCGGTTA ATCAGTACAT GGTGATCAAG
ACGCTAGTGA GTTTAGCTAC CGGGGTTATC GTCGGTGTCG GTTTAACCAT TATTGGTGTG
GATTACGCCA TGCTATGGGC GGTGATCGCC TTCCTATTTA ATTACATTCC CAATATCGGT
TCTATCATCG CCGCCATTCC TGCGGTGTTA TTAGCCTTTA TTCAGCTTGG CCCTGCGGCA
GCGGGCGGTA CTGCGCTTTT GTATGTTGGT GCCAACATGG TGATGGGCAA TATGATTGAA
CCTAAATTTA TGGGCCGCGG CTTAGGCTTA TCGACTTTAG TGGTGTTTTT ATCGTTAATT
TTTTGGGGCT GGTTGCTAGG TTCTGTCGGC ATGTTGCTGT CGGTGCCGCT GACTATGGTG
GTTAAAATTG CCCTCGAATC GAGTAAGAGT GGTAACTGGT TAGCCATTTT ATTATCGGAC
GATGTTGAAG ATAAGTTCGT GGCCAGCAAC ACGGAAAACT CAAGTTCCGA TGGCGATGAC
GCCGATATAA GTACAACAGA GAGTAAGTAA
|
|---|
| Protein sequence | MTRPNAPSAA YRGFAVMAFV VIILAGIKAA SPIVVPFVLS SFLAVICNPA IGLMTKFRVP
KWLAVILLMG FIVLMGLWLA SVVGSSVNEF SKQLPQYRVQ LVEQFAWILN KLHSFNIQIS
KDQVLAYFDP GMALSMTTNM LSGVGNVMAN LFLIILTIVF MLFEAQSLPK KLHLALDDPD
MRLKQIDRFL QSVNQYMVIK TLVSLATGVI VGVGLTIIGV DYAMLWAVIA FLFNYIPNIG
SIIAAIPAVL LAFIQLGPAA AGGTALLYVG ANMVMGNMIE PKFMGRGLGL STLVVFLSLI
FWGWLLGSVG MLLSVPLTMV VKIALESSKS GNWLAILLSD DVEDKFVASN TENSSSDGDD
ADISTTESK
|
|---|
| |