| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_1617 |
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| Symbol | truA |
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| ID | 7090018 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS223 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011663 |
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| Strand | + |
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| Start bp | 1896192 |
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| End bp | 1896977 |
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| Gene Length | 786 bp |
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| Protein Length | 261 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 643460518 |
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| Product | tRNA pseudouridine synthase A |
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| Protein accession | YP_002357545 |
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| Protein GI | 217972794 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0101] Pseudouridylate synthase |
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| TIGRFAM ID | [TIGR00071] pseudouridylate synthase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00313277 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGGATTG CATTAGGTAT TGAATATGAC GGCAATGGTT ATTTTGGCTG GCAACGTCAG
GCCGAAGTCG ATTCAGTACA AGCGCAATTA GAACGGGCGT TATCGATAGT GGCCAACGAG
CCTATCGGCG TCTTCTGCGC TGGCCGTACC GATGCGGGCG TGCATGCCAC GGGCCAAGTG
GTTCATTTTG AAACCCATGC CATTCGTAAT GAAGGCGCAT GGACCTTAGG GGTGAATGCC
AATTTACCCG ACAATATTGC CGTGCGTTGG GTTAAAGAAG TCGACGACAG TTTTCACGCG
CGCTTTTCGG CTACCGCCAG ACGCTACCGT TATGTGATTT ATAATCACAG TTTTCGCCCA
GGGATTTTAC GCCATGGTGT CAGCCATTAT CACGGCGATA TCGATGCAGA CAGAATGCAC
CAAGCGGCGC AGGCACTCTT AGGTGAGCAG GATTTTACCA GCTTTCGCGC AGTCCAGTGT
CAGTCGAAAA CGCCGTTTCG TAATGTACAT TGCGTTAATG TCACGCGCCA AGGCATGTAT
GTGATTGTTG ATATCGCCGC TAACGCCTTT TTACATCACA TGGTGCGCAA TATCGTCGGT
TCATTATTAG AAATCGGTTT AGGCAATCAG CCGCTGACGT GGATGGGCGA TTTGCTTGCG
TTAAAAGACA GAAACCAAGC CGCAGCAACG GCTAAACCTC ATGGGCTTTA TTTAGTTGAT
GTGACTTATC CAGAACAATA TCAATTGCCT AAACTCGCCC TTGGGCCATT ATTCATGTTG
GATTGA
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| Protein sequence | MRIALGIEYD GNGYFGWQRQ AEVDSVQAQL ERALSIVANE PIGVFCAGRT DAGVHATGQV
VHFETHAIRN EGAWTLGVNA NLPDNIAVRW VKEVDDSFHA RFSATARRYR YVIYNHSFRP
GILRHGVSHY HGDIDADRMH QAAQALLGEQ DFTSFRAVQC QSKTPFRNVH CVNVTRQGMY
VIVDIAANAF LHHMVRNIVG SLLEIGLGNQ PLTWMGDLLA LKDRNQAAAT AKPHGLYLVD
VTYPEQYQLP KLALGPLFML D
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