| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_1592 |
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| Symbol | |
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| ID | 7089993 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS223 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011663 |
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| Strand | - |
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| Start bp | 1861137 |
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| End bp | 1863215 |
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| Gene Length | 2079 bp |
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| Protein Length | 692 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 643460493 |
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| Product | Tetratricopeptide TPR_2 repeat protein |
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| Protein accession | YP_002357520 |
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| Protein GI | 217972769 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG5271] AAA ATPase containing von Willebrand factor type A (vWA) domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.000000228279 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCCTAC ATTTTATTCG CCCCGAATGG CTACTCGCCC TAGTGCCACT GGCTTTAGTG
TTGTTGAGTT TATGGCGACA ACACGAGAAC CACAGCGCGT GGAATCGGTA TATTGCGCCG
CACTTAGCCA AAATATTGGT CACCCAAGGC AGCAAGAAAT CCCGCCGTCC GTTGCATTTA
TTAGCTTTCA CTTGGCTGAT TGCGACTTTT GCGCTCGCCG GACCTGCCGT TAATAAACAG
TCCTTACCTG TGTTTGCCGC CGAGCAAGGC CGCGTACTGG TGATGGACAT GTCTGTGTCT
ATGTTCGCTA CCGATCTGGC GCCGAACCGT TTAACCCAAG CTAAATTTAG GGCTACGGAT
CTCCTGCGTA ATCTTAAAGA AGGTGAAACA GGTTTAGTCG CCTTTGCCGG CGATGCCTTT
ACGATCAGCC CGTTAACGCG CGATACCGGC ACGCTACTCA ATTTATTGCC GACCTTGAGC
CCTGAGATCA TGCCCGTTCG TGGCTCAAAC TTAGCGGCAG GTTTAACCCA AGCTAAAACG
CTACTGGCTC AGGGTGGGCA TATTCGCGGT GATATTATCG TGATGACAGA TGGCATAACT
GCTGCCCAAT TTGATGACGC TAACTCGGCA TTAAGTGGCA CGCAATATCG TCTTGCGGTC
GTCGCTTTTG GGACCAGCCA AGGCGCGCCA ATTCGTCTAC CCGATGGACA ATTGCAGCGC
GACAGCAGCA ACGAGGTCGT TGTGGCCAGC ACTGACTTTG GCCTGCTGCA AAAACTAGCA
GCGGATAACA AAGGCGTGTT GATCCAAAAT CGTACCGACG GCAATGATCT GGCCCAATTA
CAACATTGGT TAAGTGATAC AGGCGATGCC AAAGCCACAG ATCTTGACGG TGAAACCTGG
CAGGATCTCG GCCCTTATCT CGCCCTGCTA TTACTGCTGC CCGCCCTTTT CAGCTTTAGG
CAAGGAATCG TGGCAAGCGT TGGATTTGCC ACTCTCATTG GCGGCTTACT GCTCGCGGCC
ACGCCTCAGC CTGTCCATGC CAGTGTGTGG GACAATGTGT GGAAAACAAC AGATCAGCAA
GCGATGCAAG CCTATCAATC CCAAGATTAT GCCAACGCCG CTAAGCAGTT TGAGTCGCCC
CAGTGGCGTG GCAGCGCCCA ATATAAGGCC GGTGATTATG AGCAAGCGCT GAAAACCTTC
GAGCAAGATA GCTCTGCCCA AGGCCTCTAC AATCAAGGCA ATGCGTTAAT GCAACTCGGT
AAACCCGATA AGGCAAAGGA GCGCTATCAA GCCGCACTTG AAAAACAAGC CGATTTCCCA
GCGGCGAAGG CCAACCTTGA ACTGGCTGAA AAGCAATTGA AAGAGCAGCA AAAGCAGCAA
GGTAAAAACG ATCAACAGGA TAAGAACCAA GATCAACAAG GCGATCAGCA GTCCGGTGAT
TCCAATTCAG GTGACCAACA ATCCGGTAAT CAACAGTCAC AGGATAAACA GCAATCTGAC
CAAGATAGCG CTCAGAAAGA TAAGCAAGAT CAAGCGGGAC AAGAGTCTCA AGAGCAACAG
GACAATGCCA ATCCTGAGCA AAGCTCTGAG CAGCAAAAAG CGGATGAGCA ACAGTCTGAG
CAAGATAAGC AAAATGGCAA TGCTCAGGAC AAGCAGGATG AAGCTCAGCA AGATCCCGCA
AAAGATAAAG CGCAACAGGA TCAACAAGCC AAGCAACAAA ATGCCGAGCA GGATGCAAAG
GAAAATGAGC CTGTAGACAA TTCACCAGCA GATAATGAGG CTAAGATGCA GGCGCAGGCT
AACGCCGATG CCGAGGAGCA AAAATCCGCT GAACAAGCAA AGCAAAGCGT TGGCGCCAAG
GACGCTCCAG AGAAAAATGC GCAAGATAAA CAAGAGGCTG CTATGAGTGA ATCTGTCGAA
GCGCCGCCAA CCAATAGCGA ACCGCTTCCC GCAGAAATGC AGCGAGCGCT GAGGGGAGTG
AGTGAAGAAC CTCAAGTGTT GCTTCGCAAC AAAATGCAGT TGGAATATCA AAAACGCCGT
CAAAATGGCC AAATATCAAA GGATAACGAA CAGTGGTGA
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| Protein sequence | MSLHFIRPEW LLALVPLALV LLSLWRQHEN HSAWNRYIAP HLAKILVTQG SKKSRRPLHL
LAFTWLIATF ALAGPAVNKQ SLPVFAAEQG RVLVMDMSVS MFATDLAPNR LTQAKFRATD
LLRNLKEGET GLVAFAGDAF TISPLTRDTG TLLNLLPTLS PEIMPVRGSN LAAGLTQAKT
LLAQGGHIRG DIIVMTDGIT AAQFDDANSA LSGTQYRLAV VAFGTSQGAP IRLPDGQLQR
DSSNEVVVAS TDFGLLQKLA ADNKGVLIQN RTDGNDLAQL QHWLSDTGDA KATDLDGETW
QDLGPYLALL LLLPALFSFR QGIVASVGFA TLIGGLLLAA TPQPVHASVW DNVWKTTDQQ
AMQAYQSQDY ANAAKQFESP QWRGSAQYKA GDYEQALKTF EQDSSAQGLY NQGNALMQLG
KPDKAKERYQ AALEKQADFP AAKANLELAE KQLKEQQKQQ GKNDQQDKNQ DQQGDQQSGD
SNSGDQQSGN QQSQDKQQSD QDSAQKDKQD QAGQESQEQQ DNANPEQSSE QQKADEQQSE
QDKQNGNAQD KQDEAQQDPA KDKAQQDQQA KQQNAEQDAK ENEPVDNSPA DNEAKMQAQA
NADAEEQKSA EQAKQSVGAK DAPEKNAQDK QEAAMSESVE APPTNSEPLP AEMQRALRGV
SEEPQVLLRN KMQLEYQKRR QNGQISKDNE QW
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