| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_1584 |
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| Symbol | |
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| ID | 7089985 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS223 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011663 |
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| Strand | - |
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| Start bp | 1852299 |
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| End bp | 1853312 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 643460485 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_002357512 |
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| Protein GI | 217972761 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00000223326 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.000000000135699 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACGTCAA TTTCTCGCGT TTTTTTCTTA CTGCTGGCGC TTGCCAGTAC TCAAGTTCAG
GCTGCCTCAG TCGAAACCAT CGAAGTCTTA ACTAAACCCT ACGCCAATTG GGTCACCTTA
GATGCCACCA TAGAAGCAGT AAAAGCGGCG ACTGTGTCAG CGCAAACCTC TGGTCGTATC
GTCAAACTCA ACTACGATGT TAACGATGTT GTCCCCGAGG GAGCCGCCCT ACTAGAGATC
ACCAGTAAAG AACAAGGCGC TGAGCTCGCA AGCTTTGAGG CCGATTTAGC CAAAGCCAAA
GCCTTGAATG TTGAAGCACA GGCGCAATAC AAACGTTATA AAGAGTTATT TCCCCAAGGC
GCGATTTCTA AGGGCGCGAT GGACGAAGCC ACCGCCAATG CTAAGGCCAC AGAACAAGCC
GTAACCGCAG CGCAAGCCCG CGTCATCAAA GCCAGCGAAT CCTTAAAATA CACTGTGGTA
TCAGCGCCTT TTAGTGGTGT AGTCACAGAG CGTTTTGTCG AACTGGGTGA AACGGTGAGC
CCAGGACAAG CACTACTTTC AGGGTTTTCC GCGAGTCAAA TGCGCGCCAT TACCCAAGTG
CCGCAGCGTT ATATCAATCA GTTGAAAAAC GCCCCCGAAT TCCTCGTCCG TTTAAGTGAT
GGCCGCGAGT TAACCTCAAA GGATCTCACT ATTTTTAGTT TTGCCGATCC CGTCAGCCAC
AGCTATCAAG TACGCATTAA TCTGCCTGAA AATGAAGCCA ATCTTCAACC CGGTACTTGG
GCAAAGGCTT CCTTTAAAAA TGGCGAGCGA GAAAAAATCC AACTGCCTAC CTCAGCATTA
CTCACAATGA ACGAACTGAG CAGCGTTTAC CTTAAAAAGG GCGAAGAATT TGTACTCACC
CAAGTCCGTG TTGCTAGTCC CTTAGATGGC GAGGTCGAAG TGCTGGCGGG CCTGAAGTCG
GGCGACAAGG TTGCCGTTGA TGCCTACCAA GTGTTGCTCA ACAAAAAGCA ATAA
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| Protein sequence | MTSISRVFFL LLALASTQVQ AASVETIEVL TKPYANWVTL DATIEAVKAA TVSAQTSGRI
VKLNYDVNDV VPEGAALLEI TSKEQGAELA SFEADLAKAK ALNVEAQAQY KRYKELFPQG
AISKGAMDEA TANAKATEQA VTAAQARVIK ASESLKYTVV SAPFSGVVTE RFVELGETVS
PGQALLSGFS ASQMRAITQV PQRYINQLKN APEFLVRLSD GRELTSKDLT IFSFADPVSH
SYQVRINLPE NEANLQPGTW AKASFKNGER EKIQLPTSAL LTMNELSSVY LKKGEEFVLT
QVRVASPLDG EVEVLAGLKS GDKVAVDAYQ VLLNKKQ
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