| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_1573 |
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| Symbol | secF |
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| ID | 7089974 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS223 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011663 |
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| Strand | + |
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| Start bp | 1840201 |
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| End bp | 1841148 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 643460474 |
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| Product | preprotein translocase subunit SecF |
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| Protein accession | YP_002357501 |
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| Protein GI | 217972750 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0341] Preprotein translocase subunit SecF |
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| TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family
[TIGR00966] protein-export membrane protein SecF |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00583403 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.000000100837 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCTTGAAA TTTTATCTTT AAAACATACG GTAAACTTCC TCCGTCATGC ACTGCCTATC
AGTATTATGT CGGCTGTATT GGTGCTGGGC TCGCTGGTTT CGCTAGCGAC CAATGGCATC
AACTGGGGGC TTGATTTCAC TGGCGGCACC GTCGTTGAAA TGGAGTTCAC TAATCCGGTC
GATTTAAACG CCCTGCGGGT GCAACTGACG ACGCCTGATT CTGAAGGCGC CATTGTGCAA
AACTTCGGTT CTAGCCGTGA CGTATTAGTA CGTTTACAGG TGAAAGAAGG CGTTAAGAGT
GACGTGCAAG TTAAGTCTGT CATGGAAGCT GCGCAGAAAG TTGATCCACA AGTTCAGCAG
AAGCGTGTTG AGTTCGTTGG CCCACAAGTG GGTAAAGAAC TGGCTGAGCA AGGAGGTTTA
GCGGTATTAG TCGCGCTTAT CTGTATCATG ATCTATGTGT CATTCCGTTT CGAATGGCGC
CTAGCATTTG GTTCAGTGGC AGCACTGGCG CACGACGTGA TCGTGACTTT AGGTGTGTTT
TCGGTATTCC AATTGGAATT CGACTTGACC GTACTGGCGG GTCTATTGAC GGTTGTGGGT
TACTCACTCA ACGATACTAT CGTGGTATTT GACCGTATCC GTGAAAACTT CCTTAAGATG
CGTAAAAGCG ACCCTGAAGA AGTGGTTAAC GTTTCAATTA CTCAAACCAT GAGCCGTACA
ATCATTACTA CAGGTACAAC CTTAGTGGTG GTCGTAGCCT TGTTCCTTAA GGGCGGCACT
ATGATCCATG GCTTTGCGAC TGCATTGCTG ATGGGTATTT TTGTGGGTAC GTATTCTTCT
ATCTATGTGG CGAGTTTCTT GGCCATTAAA CTGGGTATTA ATCGTGAACA CATGATGCCA
GTTGAGATTG AGAAAGAAGG CGCAGACCAA CCTCCTATGA TGCCTTAA
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| Protein sequence | MLEILSLKHT VNFLRHALPI SIMSAVLVLG SLVSLATNGI NWGLDFTGGT VVEMEFTNPV
DLNALRVQLT TPDSEGAIVQ NFGSSRDVLV RLQVKEGVKS DVQVKSVMEA AQKVDPQVQQ
KRVEFVGPQV GKELAEQGGL AVLVALICIM IYVSFRFEWR LAFGSVAALA HDVIVTLGVF
SVFQLEFDLT VLAGLLTVVG YSLNDTIVVF DRIRENFLKM RKSDPEEVVN VSITQTMSRT
IITTGTTLVV VVALFLKGGT MIHGFATALL MGIFVGTYSS IYVASFLAIK LGINREHMMP
VEIEKEGADQ PPMMP
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