Gene Sbal223_1561 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal223_1561 
Symbol 
ID7088251 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS223 
KingdomBacteria 
Replicon accessionNC_011663 
Strand
Start bp1828423 
End bp1829319 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content47% 
IMG OID643460462 
Productresponse regulator receiver modulated CheW protein 
Protein accessionYP_002357489 
Protein GI217972738 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0835] Chemotaxis signal transduction protein
[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0294399 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.00399966 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAAAGTA AGGCAAGTCA GTCACAGGGA TTACTACTGT TTCGGTTATC ACAGACTCAA 
GTGTTTGCCT TAGGCACGTT GAAAGTGCGT GAGCTGGTGC CGTACACACG TCTCAGTAAA
ATTCCTCAAT CTCATCCGAC GATTCTGGGG GCTTCAACTA TCCGCGGCCA TACGATTCCT
ATCATAGATA TGGCAGCAGC GATTGGTTAT CGGCCGATTG CCCCTGAAGA GCGGGAAAAG
TGCTACATCA TCATCACGGA TTGTCAGCGG ATGATCATTG GTTTCTTGGT GCGTGGTATC
GATAAGATTA TCGAATGCAA CTGGCGTGAT ATTGAAGCAC CTTCGTCTAG TTTGGGTAAA
AATGCCTATT TGACCGGCGT GACACGTTTT GAGGACCAAC TGGTACAGTT GCTTGACGTT
GAACTGTTAT TGTCGAAAAT CTTCCCCGAT AATCCAAAGG CGAATCGGGC TATTTTGACC
GACGTACAAC GTGAAAAACT CAAGCCTATG AATATCCTTT TAGTGGATGA TTCTAAGGTG
GCACGTAAGC AGTTATCCGA CGCCCTTGAT ATGATTAACA TTCCTTATCG AGTCACGGCA
GACGGTAAAG AAGCGCTAGT TATGATGGAG CAAGCGGCAC TGGAACATCA CCCGATAGAT
ATTCTGGTGA GTGATATCGA GATGCCGGGA CTGGATGGTT ACGAACTGGC TTTTGAAGTG
CGTGATAATC CACTGACTGC CAAGGCCTAC ATTATTTTGC ACACTTCTTT ATCCAGCGAA
ATTAGCGTGA GTCAGGCCCA TCAAGTAGGG GCGAATGAAG CACTGACTAA GTTCGATGCC
CACGAGTTAA TCGACGCCAT GTTACGGGGC GCCGATCTCG CCTTAGACAA GCGCTAA
 
Protein sequence
MKSKASQSQG LLLFRLSQTQ VFALGTLKVR ELVPYTRLSK IPQSHPTILG ASTIRGHTIP 
IIDMAAAIGY RPIAPEEREK CYIIITDCQR MIIGFLVRGI DKIIECNWRD IEAPSSSLGK
NAYLTGVTRF EDQLVQLLDV ELLLSKIFPD NPKANRAILT DVQREKLKPM NILLVDDSKV
ARKQLSDALD MINIPYRVTA DGKEALVMME QAALEHHPID ILVSDIEMPG LDGYELAFEV
RDNPLTAKAY IILHTSLSSE ISVSQAHQVG ANEALTKFDA HELIDAMLRG ADLALDKR