| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_1558 |
|---|
| Symbol | |
|---|
| ID | 7088248 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS223 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011663 |
|---|
| Strand | + |
|---|
| Start bp | 1825852 |
|---|
| End bp | 1826409 |
|---|
| Gene Length | 558 bp |
|---|
| Protein Length | 185 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 643460459 |
|---|
| Product | methylated-DNA/protein-cysteine methyltransferase |
|---|
| Protein accession | YP_002357486 |
|---|
| Protein GI | 217972735 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0350] Methylated DNA-protein cysteine methyltransferase |
|---|
| TIGRFAM ID | [TIGR00589] O-6-methylguanine DNA methyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.382587 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.00333617 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAAACATG CGATTCGTCA ATTGAGCCAA GCGCCAAGCA TTGCAGAATA TCAACCCTGC
GCTGTAGATA CATTTATCAG TCCTGCCGGA ATATTGCAGT TAAATGCCAA TGCCTATGGA
CTGAGCCATT TAACGGTTGT CGGCTCGGAT CGCACTGAGA TTGCGCTTGC CAAGGCGAGT
GAGGATGCCC TTAATCAAGC TAAGGCGCAT ATTCGCGAAA CTCAGACGCA GCTTGCGAAT
TACTTTGCAG GTGAGCGGGT TGAATTTGAT TTAAAGCTCG CGCCCAAGGG CACTGAATTT
CAGCGCGACG TATGGCAAGC CTTGCTCAAT CTAGATTACG GCCAGAGCTG CAGTTATGGG
CAGATTGCCG AGCAAATCGG TCGGCCTAAG GCAGTGCGCG CCGTGGGCGC GGCCAATGGC
GCCAATCCAA TCGCGATTAT TGTGCCTTGC CATAGAGTAA TAGGCAAAAA TGGCAAGTTA
ACGGGTTACG CCTACGGGCT TGCGATGAAA CAGCAGTTGT TAACGCTGGA AACTGACAAG
CACTGCCTCG ATATTTAA
|
|---|
| Protein sequence | MKHAIRQLSQ APSIAEYQPC AVDTFISPAG ILQLNANAYG LSHLTVVGSD RTEIALAKAS
EDALNQAKAH IRETQTQLAN YFAGERVEFD LKLAPKGTEF QRDVWQALLN LDYGQSCSYG
QIAEQIGRPK AVRAVGAANG ANPIAIIVPC HRVIGKNGKL TGYAYGLAMK QQLLTLETDK
HCLDI
|
|---|
| |