| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_1557 |
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| Symbol | |
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| ID | 7088247 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS223 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011663 |
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| Strand | + |
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| Start bp | 1824050 |
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| End bp | 1825747 |
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| Gene Length | 1698 bp |
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| Protein Length | 565 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 643460458 |
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| Product | transcriptional regulator, AraC family |
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| Protein accession | YP_002357485 |
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| Protein GI | 217972734 |
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| COG category | [F] Nucleotide transport and metabolism
[L] Replication, recombination and repair |
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| COG ID | [COG0122] 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
[COG2169] Adenosine deaminase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.486878 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.00513105 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGTACAG ATAGAGCGTC TGAGAGTGCG ATTAAGCGTG ATGAAATAGA CTCAGTGCAT
TCACTGGAAT CCAGTGCGGG GCTACTTTCT GCGTCCATTT GCCGTGAGGC GAGGATGAGC
CGCGATCCGC GTTTTGATGG TAAGTTTTTT GTGGGCGTAT TAACGACGGG CATTTATTGC
CGTACCGTGT GTCCCGCCGT CGCGCCAAAA GAGCAGAATG TGCGTTATTT TGATTCGGCC
GTGAAAGCCG CACAAGCTGG ATTACGCCCG TGTTTGCGTT GTCGGCCCGA CAGTGCGCCA
GGTTCAAATC CGTGGAAAGG CACTGGCACA ACGTTGGCGA GGGCCATTAG TTTAATTGAA
GCGGGCGCAT TAGCGGGGAA ATCATCGGGA GAGCCAGCGT CGACTGTGAC ACAATTGGCT
GACAGATTAG GGATCAGTAG TCGTTATCTC AATAAGCTCT TTACCGAAGG TTTTGGCACT
TCGCCTAAAC AATATGCCTT ATACCGGCAG TTACTGTTTG CAAAACAACT GCTACATCAA
ACCCAATTAC CTATCACCCA AGTCGCGTTG GCGGCGGGTT TCAACAGTAT TCGCCGTTTC
AATGAGGCAT TTAAGCAAAC CTTACAATTG ACGCCAACTC AATTAAGAAA GACCGCGTTA
ACTAAGGCGG CAAAGGAGCA GGATATTGAT TCATCAACAG GATTCGGTGA AATTGATACT
TTGGGTGAAT TTGTGCCGCA CTATGGATTA ACCTTATATC AATACTATCG ACCCCCATTG
GATTGGGCAT CGCAGCTGGC ATTTTATCGC TTACGTGCAG TGACAGGAAT GGAGTGGTTT
ACGCCGCAAA TGAGTCATCC ACAAGCGAGC GATGCAGTTC AGATTGCAGA TGAAACCTAT
GTTTCAGCAG AAGCCAAGGC TGACGATAAC GGGCTCGAAT ATGGTCGCTG TTTTGCCATA
GGCAAGATGC GCGGCACAGT GCAAATTATC CATGAACCTA AGCTAAATCG CTTCAAACTT
GCGATTGCTT TGACCGAAGA TTCCGCCGTC GATGAGTTGC AATTGCTGGT CACTGAGGTG
CGACGCATTT TAGATCTCGA TGCGGATATG CAGCAGATTG AGCAAGGTTT AAGTACGCTG
CCGAGTTTAG GTTTAACACC GTTTTCGGGA TTGCGCATTC CTGGCGCAGG ATCTTTGTTT
GAAGCGGTTT GCCGCGCGAT TTTGGGCCAG CAAGTGACGG TCGTGCAGGC AACTAAGTTA
CTGAATATAT TGGTTGAAGC CTATGGCGAG CGCTTTAGTC TCAATGGCCG CGAGTATCGA
TTATTCCCAA CACCCGAGGC GATTCGTGAG GCGAGTTTAA CTGAGCTAAA AATGCCGGGC
GCCCGTAAAT TAGCCCTCAA TGCGCTCGCG GCGTTTATCT GCGAACATCC TGAGGCGAGT
GTCGATGATT GGCTTAGCGT TAAAGGCATA GGTCCTTGGA CGATAGCGTA TGCCAAGCTT
CGTGGCTTGG GCGATCCAAA CGTGTTTTTA CATTCGGATT TGATTGTTAA AAAGCATTTA
TTGGCCTTAT ATATCAAGAA CAATAAGTTA GATGAAACGG CAGCCGCAGC AGTGAGCTAT
CCCAAATTGT GCGAGCAGCT GAGTCAACAA ATTGCCCCGT GGGGCAGTTA CTTAACCTTT
CAGCTCTGGC ATCAATAA
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| Protein sequence | MSTDRASESA IKRDEIDSVH SLESSAGLLS ASICREARMS RDPRFDGKFF VGVLTTGIYC
RTVCPAVAPK EQNVRYFDSA VKAAQAGLRP CLRCRPDSAP GSNPWKGTGT TLARAISLIE
AGALAGKSSG EPASTVTQLA DRLGISSRYL NKLFTEGFGT SPKQYALYRQ LLFAKQLLHQ
TQLPITQVAL AAGFNSIRRF NEAFKQTLQL TPTQLRKTAL TKAAKEQDID SSTGFGEIDT
LGEFVPHYGL TLYQYYRPPL DWASQLAFYR LRAVTGMEWF TPQMSHPQAS DAVQIADETY
VSAEAKADDN GLEYGRCFAI GKMRGTVQII HEPKLNRFKL AIALTEDSAV DELQLLVTEV
RRILDLDADM QQIEQGLSTL PSLGLTPFSG LRIPGAGSLF EAVCRAILGQ QVTVVQATKL
LNILVEAYGE RFSLNGREYR LFPTPEAIRE ASLTELKMPG ARKLALNALA AFICEHPEAS
VDDWLSVKGI GPWTIAYAKL RGLGDPNVFL HSDLIVKKHL LALYIKNNKL DETAAAAVSY
PKLCEQLSQQ IAPWGSYLTF QLWHQ
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