Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_1550 |
Symbol | |
ID | 7088240 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | - |
Start bp | 1812553 |
End bp | 1813950 |
Gene Length | 1398 bp |
Protein Length | 465 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 643460451 |
Product | TRAP dicarboxylate transporter, DctM subunit |
Protein accession | YP_002357478 |
Protein GI | 217972727 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component |
TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0883981 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.362308 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGATCG CAACCCTATT TACCGCCCTA TTAGTGTGTA TGTTTCTCGG TATGCCTATC GCTATCGCGT TAGGTTTTTC CAGCATGCTC ACCATTTTGT TTTTCTCGAA TGACTCCTTA GCCTCAGTTG CACTCAAACT GTATGAGTCT TCATCGGAGC ATTACACTCT ACTCGCTATC CCCTTCTTTA TTCTGTCATC CGCCTTCCTC TCAACCGGTG GCGTCGCGAG ACGGATTATC GATTTTGCCA TGGACAGTAT TGGACATGTC CGTGGTGGAT TAGCGATGGC ATCTGTTATG GCCTGTATGC TGTTTGCGGC GGTTTCAGGC TCATCACCCG CGACCGTAGC GGCGATTGGT TCAATCGTGA TTGTGGGCAT GGTTAAAGCG GGTTATCCCG AGAAGTTTGC GGCGGGGGTT ATCACCACCT CAGGCACACT TGGTATTTTG ATCCCACCGT CCATTGTGAT GTTGGTGTAT GCGGCAGCGA CCGAAGTGTC CGCAGCAAGA ATGTTTATGG CAGGTTTAAT CCCAGGTTTA ATGATGGGAT TCATCCTGAT GATCGTTATC TACATTGTCG CCCGCTTTAA GAACTTGCCT TCGCGTCCTT TCCCAGGCTT TAAACAACTG GGGATTTCAA GCGCCAAAGC TTTGGGTGGA TTAGCACTCA TCCTTATCGT ACTCGGCTCT ATCTATGGCG GCGTTGCTAG CCCGACTGAA GCTTCGGCTG TGGCTTGTAT GTATGCGTAC TTTATTGCGG TATTTGGTTA CCGTGACATT GGGCCATTAA AAGAGGTGGC TTGGCGCAAT CAAGGTGAAA GCTTACCTAA AGCCGCTGCA CGTAACTTAG GTCACATGTT CCTTGGGCTA ATTAAAACGC CTATCGACAA AGACATACGT AACGTAGTGC GTGATGGTGC TAAGGTCAGT ATCATGTTGC TGTTTATCAT AGCTAACGCT ATGTTGTTCG CGCATGTATT AACCACTGAG CGTATTCCAC ATATTATCGC TGAGCATATC GTTAACATGG GCTTACCCGC TTGGGGCTTC CTGATCATCG TTAACTTACT GCTACTTGCT GCCGGTAACT TTATGGAGCC ATCGGCAATT GTACTGATTA TGGCGCCGAT CCTCTTCCCT ATCGCGACTC ACTTAGGCAT TGATCCTATA CACTTAGGTA TCATCATGGT GGTGAACATG GAGATAGGTA TGCTCACGCC GCCGGTGGGG CTCAACCTCT TTGTTACCGC GGGGATCACG GGTAAGAGTA TTGGTTGGGT CATCCAGTCG GTTCTGCCTT GGTTACTGCT GATGTTAGCC TTCTTAACCT TGATCACTTA CGTGCCACAG ATTTCGCTCT TCTTACCAGA GTGGTTGGAT TCGATGCGTG GATATTAA
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Protein sequence | MAIATLFTAL LVCMFLGMPI AIALGFSSML TILFFSNDSL ASVALKLYES SSEHYTLLAI PFFILSSAFL STGGVARRII DFAMDSIGHV RGGLAMASVM ACMLFAAVSG SSPATVAAIG SIVIVGMVKA GYPEKFAAGV ITTSGTLGIL IPPSIVMLVY AAATEVSAAR MFMAGLIPGL MMGFILMIVI YIVARFKNLP SRPFPGFKQL GISSAKALGG LALILIVLGS IYGGVASPTE ASAVACMYAY FIAVFGYRDI GPLKEVAWRN QGESLPKAAA RNLGHMFLGL IKTPIDKDIR NVVRDGAKVS IMLLFIIANA MLFAHVLTTE RIPHIIAEHI VNMGLPAWGF LIIVNLLLLA AGNFMEPSAI VLIMAPILFP IATHLGIDPI HLGIIMVVNM EIGMLTPPVG LNLFVTAGIT GKSIGWVIQS VLPWLLLMLA FLTLITYVPQ ISLFLPEWLD SMRGY
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