Gene Sbal223_1549 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal223_1549 
Symbol 
ID7088239 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS223 
KingdomBacteria 
Replicon accessionNC_011663 
Strand
Start bp1810627 
End bp1812423 
Gene Length1797 bp 
Protein Length598 aa 
Translation table11 
GC content47% 
IMG OID643460450 
Producthistidine kinase 
Protein accessionYP_002357477 
Protein GI217972726 
COG category[T] Signal transduction mechanisms 
COG ID[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.924403 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.563022 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGCCCA TGACGCCTAA GGCCAAGAAA CGCCTCTTTC TCACTGTAGT GTTACTTGCA 
GGCCTATTTG CAACGCTCAA ACTGACCTAT TGGGTGCATT TGCATCAGGG TAAAATCGAG
ATCCAAACCC AATCGGAGAA ACAACTAAAA GAATTAGTCA GCTTTCTCGA TGGCGCGTTA
TCGCGCTACG AAAGTATTCC CCACGTACTC TCGACGAACC CTATGCTCGC CAATGTACTG
AACGATCAAC AAAACCCCGA TAAAGTCCAA GAACTTAATT TATATCTCGA AGAAATCCAG
CATGTCACTG AGGCGTCCGA TATCTATCTG ATTGATGCCT TAGGGATTGC GATTGCCGCC
AGTAACTGGC AACAAAGTTT CTCCTTTATT GGCAAGGATT ATTCCTTTAG ACCCTATTAC
ACCGATGCTA TTTCGGGCAA TCTAGGCCGT TATTATGCCG TGGGCACCAG CTCAGATAAG
CGTGGGTTTT ACTTTTCTTA CCCTATTTAT CAGCAAGGCG GCAAAGGCAT ACTCGGCGCT
ATCATAGTCA AAGTGGACAT TAGCGGTATC GAGCAGCAAA GCACGAGCAT TGCCATTGCG
GGTCAATACC AATTCCTTAT CAGCGACCCT GAAGACATTG TTTTTATCTC TAGCGTCGAT
GAGTGGCGGT TAAAGTCACT CACTCCACTT ACCCAAGCCA AACAATATGC GCTTAATGCA
TCAAAGCGTT ACGCGGAACG CCCCATCGGC GAGCTGTTAA TGAAACCGCC CTATGAGAGT
GGCAGCCAAG CCATGCTCTA CCAATTACAA ACGGGCAGAG ATCATGAGCA ATACATGGAT
AATCATCAGT TAATGGCCAA AGCTGGCTGG CGGGTGCACA TCTTAGCGCC CATCAAACCC
TTGCTGTCGT CTTTACCTGC ATTGATGTTA CTGTCAGCCA GCATTTATCT GTTGCTGGCG
CTCAGCATCT TGTTTAGTGC CGAGCGTCGC CGCAACCTAC AGCGCATGCA GCTGGCACAA
AGCCTGTTAG AACAACGCGT AGAAGAACGA ACTCAGGACT TGCAGCAGGC GAACCATCAA
CTGAAAGACA CTCAGGATGA ACTCATTCAA GCGGCAAAAC TGACTGTGAT CGGCAGTTTA
TCCGCCAGCA TTAACCATGA GCTTAATCAG CCGCTTGCAG CACTGCGCAG CTACGCCCAA
AATACTCAAA CCTTTCTAGC CCGTAATATG CAAGATAAGG CACTGGATAA TATCAAGATT
ATTATTGAAC TGACCGATAG ATTGGCCGAT ATTGTCGGCC AATTTAAAAG CTTCACTCGC
AAGAGCCAAG GCACGGATAG CGCTACCGAT ATTGGCCGCT GTATCAAACA AGCGCTGACC
ATAGTTCAGC CCGCAATAGA CAAGCAAGGC GTTGAACTCG ATGTGCAGTT ACCCAATGGC
AACTATCAGG TTTGGGGCGA TAAAGTCCGA TTACAGCAAG TGTTTGTCAA TATCATGAGC
AACGCCATTG TCGCTATGCA ACAATCGGTT AAACGCAGCT TGGTCATCCG CGTGACCAGT
GAAGATAAGT TCTGTATCAG CATCCAAGAT TCTGGCCCTG GCGTGCGTGA AAGCCAAATG
GAAAAAATAT TCGAACCTTA CTTTACCACT AACGAGCGCC ACGGATTAGG GCTGGGCTTA
TCGATTTCAC AGCGTATTAT CGAATCCATG CAAGGCCAAA TTAACGTTGC CAATGCCGAA
GAGGGTGGCG CCATTTTCCA GATTATTTTA CCTATTTATT TGCTTGAGGA ACGTTAG
 
Protein sequence
MLPMTPKAKK RLFLTVVLLA GLFATLKLTY WVHLHQGKIE IQTQSEKQLK ELVSFLDGAL 
SRYESIPHVL STNPMLANVL NDQQNPDKVQ ELNLYLEEIQ HVTEASDIYL IDALGIAIAA
SNWQQSFSFI GKDYSFRPYY TDAISGNLGR YYAVGTSSDK RGFYFSYPIY QQGGKGILGA
IIVKVDISGI EQQSTSIAIA GQYQFLISDP EDIVFISSVD EWRLKSLTPL TQAKQYALNA
SKRYAERPIG ELLMKPPYES GSQAMLYQLQ TGRDHEQYMD NHQLMAKAGW RVHILAPIKP
LLSSLPALML LSASIYLLLA LSILFSAERR RNLQRMQLAQ SLLEQRVEER TQDLQQANHQ
LKDTQDELIQ AAKLTVIGSL SASINHELNQ PLAALRSYAQ NTQTFLARNM QDKALDNIKI
IIELTDRLAD IVGQFKSFTR KSQGTDSATD IGRCIKQALT IVQPAIDKQG VELDVQLPNG
NYQVWGDKVR LQQVFVNIMS NAIVAMQQSV KRSLVIRVTS EDKFCISIQD SGPGVRESQM
EKIFEPYFTT NERHGLGLGL SISQRIIESM QGQINVANAE EGGAIFQIIL PIYLLEER