| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_1543 |
|---|
| Symbol | |
|---|
| ID | 7088233 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS223 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011663 |
|---|
| Strand | - |
|---|
| Start bp | 1804674 |
|---|
| End bp | 1805555 |
|---|
| Gene Length | 882 bp |
|---|
| Protein Length | 293 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 643460444 |
|---|
| Product | transcriptional regulator, LysR family |
|---|
| Protein accession | YP_002357471 |
|---|
| Protein GI | 217972720 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATATCC GCCAACTCAA ACATTTAGAT GCCCTTGCCA GTACTGGCAG CTTTACCGCC
GCAGCCAAGA AACTGAATAT GGCTCAACCG GCGTTAAGCC AAAGTATCAA GCGCTTAGAA
GTCGCACTCG GCGTGACTTT GGTCAATCGT ACGAGCAACA AGAATGACAA GCTACTCGCA
CTCACGGCCG AAGGTTTAGT CTTGCATCAA CATGCCACTT TGATCCTGAA ACAGATTAAG
CAGGCCGAAG CGCAAATCCG CGCCATGGCC AATCTCACCT CGGGGGAAGT CCGTATTGCC
GTGCCGGGCA TGCTGGGGTC TTTCTACCTG CCCTCACGCT TAATGGCTTT TCGGCATAAA
TACCCCGAGT TAAAACTATC ACTGTTTGAG GGCGGGACGC GCGACGCGTT GCGTATGTTG
CAACAGGAAG AAGTGGATAT AGCGATCATT ACCGCCCAAG ACCTGCAACC CGAATTTGAT
AGTCAGCTGT TGATCCGTGA GCAAATGGTA ATCGCTATGG GAGCCGAACA TCCTTTAGCG
GAACATAGCG CCGTCAGTCT CAATGACTTT TTCGATCATG AATTAGTCAT GTTCAAGACT
GGTTATTTCC ACCGCGAGTG GATCCTATCG CAAGCCAAGG ATCTGGGGAA AAAGCCCAAT
GTCGCCTTCG AGACTAATCT GATTAACCTT ATCAAACAGA TTGTTTCCCA AGGATTTGGG
ATCACCAGCG TGCTCGAAAT GGCAATCAGT TCAAAAGATG ACATTTTAGC TAAACCCTTC
GATCCACCAG TATTTTTGAA CCTGCATATC GCATGGAAAA AACAACGCCC CGTCAGTCAA
GCAGACCGTG CCTTTGTCGA TTTTTTGATG AGTAATCGCT AA
|
|---|
| Protein sequence | MDIRQLKHLD ALASTGSFTA AAKKLNMAQP ALSQSIKRLE VALGVTLVNR TSNKNDKLLA
LTAEGLVLHQ HATLILKQIK QAEAQIRAMA NLTSGEVRIA VPGMLGSFYL PSRLMAFRHK
YPELKLSLFE GGTRDALRML QQEEVDIAII TAQDLQPEFD SQLLIREQMV IAMGAEHPLA
EHSAVSLNDF FDHELVMFKT GYFHREWILS QAKDLGKKPN VAFETNLINL IKQIVSQGFG
ITSVLEMAIS SKDDILAKPF DPPVFLNLHI AWKKQRPVSQ ADRAFVDFLM SNR
|
|---|
| |