| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_1521 |
|---|
| Symbol | |
|---|
| ID | 7088211 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS223 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011663 |
|---|
| Strand | - |
|---|
| Start bp | 1777573 |
|---|
| End bp | 1778331 |
|---|
| Gene Length | 759 bp |
|---|
| Protein Length | 252 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 643460422 |
|---|
| Product | protein of unknown function DUF81 |
|---|
| Protein accession | YP_002357449 |
|---|
| Protein GI | 217972698 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0730] Predicted permeases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.192995 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACTGGC TTATTATTGC ACTCGCTGGC TTTTTAGGCG GTATGCTCAA TGCGGTTGCC
GGCGGTGGCA GTTTTATTAC CCTTTTGGCG TTAGTGTTTG TCGGGGTTCC ACCGATTGCG
GCGAATGCAA CGGGGACAGC TGCGCTGCTG CCCGGGTATA TCGCCAGTGC TTGGCGTTTT
AGAAAAGATA TCGAATATCC GGCGAGTCTT AGCCTTAAGC ATCTGATCTT GATTGCCCTT
ATCGGCGGCA GTATTGGCGC GGGTATTTTG CTGACCACCA GCGAGCAAGT CTTCGCAAAA
CTGATCCCTT GGCTGATTTT ACTGGCCACC GCGGCCTTTA TTGTTGGCCC TTGGTTGCTC
AAACGAAGAA TCGCTGAGCA AGGCGAAAAC CCCTCAACGC CAATGTTAAG TCCGATGACA
TCACTGATAA TGCTGTCGAC TGTGTGTATC TATGGTGGTT ATTTTAATGG TGGCTTAGGC
ATCATACTGC TCGCGAGCTT TGGGCTGATG GGCCAGACCA ATCTGCATGG GATGAACGGT
CTTAAAAATC TCATTTCTGC CCTGCTCACC GCCATCGCCG TTGTAGTTTA TGCCGCGGGC
AATGTTATCG ATGGGCAATA TCTGTTGCTG CTTGCTGTGA TGGCGATTAT CGGCGGCTAT
GTGGGTGCGG CGCTGGCCTA TCGTATTTCA CAGCCCTTGC TGCGCGGCTT TATTGTGATA
GTTGGGTTGG CAATGGCCTT AGGCTTTTTC ATGCGCTAG
|
|---|
| Protein sequence | MDWLIIALAG FLGGMLNAVA GGGSFITLLA LVFVGVPPIA ANATGTAALL PGYIASAWRF
RKDIEYPASL SLKHLILIAL IGGSIGAGIL LTTSEQVFAK LIPWLILLAT AAFIVGPWLL
KRRIAEQGEN PSTPMLSPMT SLIMLSTVCI YGGYFNGGLG IILLASFGLM GQTNLHGMNG
LKNLISALLT AIAVVVYAAG NVIDGQYLLL LAVMAIIGGY VGAALAYRIS QPLLRGFIVI
VGLAMALGFF MR
|
|---|
| |