Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_1520 |
Symbol | |
ID | 7088210 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | - |
Start bp | 1776168 |
End bp | 1777370 |
Gene Length | 1203 bp |
Protein Length | 400 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 643460421 |
Product | glucose sorbosone dehydrogenase |
Protein accession | YP_002357448 |
Protein GI | 217972697 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2133] Glucose/sorbosone dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0233321 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACGGA TCACCTTTAA ACTAAGCAGC TTGAATCTAA CGACCTTGAA GCTGAGCACC TTAAGTCTTG CCCTGTGTCT TGTTGCAAGC TCACCCGCTA TTTACGCGCA AAACACTAGT GCTGCAACCA TTAGCGTCAA AACGGAAACG GGTAACATTC AGGTAAAAAC CATAGCCCAA GGGTTAGAGA ATGTCTGGGG TATGGCATTT TTACCCGACG GCAGCATGCT CGTGACTGAA CGCGCCGGCA GAATGCGCAT TGTCAGCGCC GCAGGTAAAG TGGGCGAACC CTTAACGGGT TTGCCACCGC TATATGCCAA GGGCCAAGGT GGTTTACTCG ATGTGGTGCT TGCGCCAGAT TTTGCCAGCA GCAAAAAAAT CTATTTCAGT TATTCAGAAC CCGCTGAAGG TGATGCAAGT GAACTCAATA GCACTGCGGT GAGTTTTGCT ACTCTCAATG GCAACAAGCT TGAAAATCTC AGCCGCGTTT TTAGTCAGCA ACCCAAAATC AACAGCGGCC ACCATTTTGG ATCTCGTTTG GTGTGGGCGC CTGACGGCAC TTTATTTATC ACACTTGGCG ATCGTTACAG CGAAAAAGAT AGCGCCCAAA CATTAGACAA TCATTTAGGC AAAGTGGTGC GGATTAATGC CGATGGCTCA GTGCCTAAGG ATAACCCCTT CATCAATACG GCGGGCGCTT TGCCCGAGAT CTGGTCTATT GGTCATCGCA ATATGCAAGG CGCGGCCATT AATCCCACCA GCAAAGTATT ATGGACTGGC GAGCATGGAC CGCAGGGCGG CGATGAACTC AATATTGATG AGGCGGGCAA AAACTATGGC TGGCCTGTGA TTACCTATGG TGAGAATTAC GGCGGCGGCA AAATCGGCGA AGGCACCCAT AAGGTGGGAA TGGAGCAACC CGTCTACAAA TGGGTTCCCT CTATTGCCAC GGCGGGCTTT ATATTTTACA CGGGTGACAA ATTTCCGCAG TGGCAAAATA ATATTTTACT CGCCAGCCTA AAGGAAAAAA CGCTAGTGCG TTTAGTGCTT GATGGCGACA AGATTATTAA AGAAGAACGG CTGCTGAAAA ATGAATTGGG GCAAAGATTA CGCTCAGTCG TGCAAGGGCC TGATGGGTTG ATTTATCTTG TGACCGATGA AGCGAAATCA AAAATTTACC AGATCTCACC GCAGCAATAT TAA
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Protein sequence | MKRITFKLSS LNLTTLKLST LSLALCLVAS SPAIYAQNTS AATISVKTET GNIQVKTIAQ GLENVWGMAF LPDGSMLVTE RAGRMRIVSA AGKVGEPLTG LPPLYAKGQG GLLDVVLAPD FASSKKIYFS YSEPAEGDAS ELNSTAVSFA TLNGNKLENL SRVFSQQPKI NSGHHFGSRL VWAPDGTLFI TLGDRYSEKD SAQTLDNHLG KVVRINADGS VPKDNPFINT AGALPEIWSI GHRNMQGAAI NPTSKVLWTG EHGPQGGDEL NIDEAGKNYG WPVITYGENY GGGKIGEGTH KVGMEQPVYK WVPSIATAGF IFYTGDKFPQ WQNNILLASL KEKTLVRLVL DGDKIIKEER LLKNELGQRL RSVVQGPDGL IYLVTDEAKS KIYQISPQQY
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