| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_1502 |
|---|
| Symbol | |
|---|
| ID | 7088192 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS223 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011663 |
|---|
| Strand | + |
|---|
| Start bp | 1750721 |
|---|
| End bp | 1751608 |
|---|
| Gene Length | 888 bp |
|---|
| Protein Length | 295 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 643460403 |
|---|
| Product | transcriptional regulator, AraC family |
|---|
| Protein accession | YP_002357430 |
|---|
| Protein GI | 217972679 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.0346176 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.551578 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGGGCGATA ACACCTTGAA TCAAGTAACT GACACTCCTT TATCTCAGCA GCACATCACT
CAGCACACGC AGGTGGCGCC ATCACGTTTA GCCGCCGCAG GGCTAAGCGC ATCCATCATG
TTACTTAAGC GAACGCTCAA GCCGTTTGAA CATGTGCAGC GCCATCGTCA TTCTTGGGGA
CAGGTCATTT ATGCCAGCCA AGGCGTGTTG AGTGTGATCA CGCCTGCGGG GCGTTACATA
GTGCCGCCTG AACAAGCGGT GTGGGTGCCT CCCTTTGTCG ATCATGAGGT TATCGCGCTA
AGTCAGGTGC AATTGAGCAG TCTGTATTTG GATGAAACCC AGATCGGCGG TTTTCCACCC
GACTGTACTT GTTTGAGTGT GAAGCCTGTT TTGCAGTTGT TACTGCAAGA GGCTAATGAC
TTGGTGAAGA GTGAGGCAGG GCTGATTGAC CCCGATTTTA AGGATAGCGT CATGCGACTG
TTGATGGTGA TCCGTGATTT TATGGTGCTC GCACCTAAGG TCGCCTTAGA TTTACCTTAT
CCTAAGGATA AAAAATTACT GCGCATTACC GGGGCTTTGC TTGCGGATCC GAGCGAGCAA
CGTACTTTGG TGGATTGGCA GCGGGAGGTC GGCGCCTCGG CTCGCACGTT AGCGAGATTA
TTTAAACAGC AAACTGGGCT AAGTTATAGC CAATGGCTGC AAAGGCTTAG ATTGCAGGTG
GCGATTCAAA TGCTCAGTCG AGGTGAATCA GTGCTCACTA CAGCGTTATC TTTAGGTTAT
GCCTCGGGAT CAGCCTTTGG TTATATGTTT AGGCAGTTGA TGGGCGTCGC TCCGAGTCAG
TACCTTTTAG CGCAAAGTAC CTTGCCAAAA GTACAGTGCC AAAAATAA
|
|---|
| Protein sequence | MGDNTLNQVT DTPLSQQHIT QHTQVAPSRL AAAGLSASIM LLKRTLKPFE HVQRHRHSWG
QVIYASQGVL SVITPAGRYI VPPEQAVWVP PFVDHEVIAL SQVQLSSLYL DETQIGGFPP
DCTCLSVKPV LQLLLQEAND LVKSEAGLID PDFKDSVMRL LMVIRDFMVL APKVALDLPY
PKDKKLLRIT GALLADPSEQ RTLVDWQREV GASARTLARL FKQQTGLSYS QWLQRLRLQV
AIQMLSRGES VLTTALSLGY ASGSAFGYMF RQLMGVAPSQ YLLAQSTLPK VQCQK
|
|---|
| |