| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_1500 |
|---|
| Symbol | |
|---|
| ID | 7088190 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS223 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011663 |
|---|
| Strand | - |
|---|
| Start bp | 1748429 |
|---|
| End bp | 1749553 |
|---|
| Gene Length | 1125 bp |
|---|
| Protein Length | 374 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 643460401 |
|---|
| Product | Patatin |
|---|
| Protein accession | YP_002357428 |
|---|
| Protein GI | 217972677 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1752] Predicted esterase of the alpha-beta hydrolase superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.00000109081 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.428917 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGCCTACAT CAACTGCATT AGTCTTAGGT GGCGGCGGCG CAAGAGCCGC CTATCAAGTC
GGCGTGCTAA AAGCACTGGT TCAGCTTTAT CCGCGTAATC ATGGCATTCC CTTTAAAATC
ATTTGTGGCA CCTCGGCAGG TGCCATTAAT GGCACTTCCA TTGCTACCCA TGCTTCTTGT
TTTCATCTTG GCGTCAAAAA GCTTGAATGG GTGTGGCGCC ATTTTGAGAC TCGCAAAGTG
TATCGCGCAT CCATCACGGG CGTGCTTGGC CACCTAGGTA AAATGGCACT CAAAGGCATG
CAGGATGATA AGGTTAATAC CGATGCAGGC AGTCTGCTCG ATAACGATCC ACTCCGAAAA
CTGCTCAATG AATTAATCGA TTTTAAACGC ATCGATCGTA ATATTCGCAG CGGCGCACTC
ACCGCACTCA GCGTCGATGC CTCTTGCTAC AACAACTCAC GCTCAGTAAG TTTTTTCCAA
GCATCACGGG ATATCGAAAA CTGGACCCGC GCCAGACGCA GCGGCGAACG TATGATGCTC
AACACTGAAC ACCTACTCGC CAGTTCGGCC ATCCCTATGG TGTTCCCCTC CATCAAACTC
AATCAAGCCT ATTATGGCGA TGGCTCGGTC CACCAGTTGG CACCGCTCTC AAGTCCTATC
CATTTAGGCG CCGAAAAACT CTTAGTCATT AACTTAGAGA GTCCACACAA ACACTTCCCA
ATGGAACTGG AATATCACCC GAAAACGGCA TCCATAGCGG GCCATCTGCT CGATACGATC
TTTTCCGACA CTTTAAACAG CGACCTTGAG CGACTTGAAA GAATCAATAA CACCTTAAGC
CTGATCCCCG AGTCAAGCCG TAACAAGCTG GCCTTGCATC CAATTAAAAC CTTAGTCATC
AAGCCCAGCG AAGATCTCAG CAAAATTGCC GCCCGCTTCT ACGATGACAT GCCATGGGCA
GTAAAAACCT TACTCGGTTT TATCGGCATT GATAGGCAAT CCGACTCGAG TATCGTGTCC
TATCTATTAT TTGAAAAAAC CTACACCAGC GCGTTGATCG ACCTGGGCTA CAAAGATGCC
ATGGAGCAAA TCGACGAACT TAAAGCTTTC TTTTGCTTAA AATAA
|
|---|
| Protein sequence | MPTSTALVLG GGGARAAYQV GVLKALVQLY PRNHGIPFKI ICGTSAGAIN GTSIATHASC
FHLGVKKLEW VWRHFETRKV YRASITGVLG HLGKMALKGM QDDKVNTDAG SLLDNDPLRK
LLNELIDFKR IDRNIRSGAL TALSVDASCY NNSRSVSFFQ ASRDIENWTR ARRSGERMML
NTEHLLASSA IPMVFPSIKL NQAYYGDGSV HQLAPLSSPI HLGAEKLLVI NLESPHKHFP
MELEYHPKTA SIAGHLLDTI FSDTLNSDLE RLERINNTLS LIPESSRNKL ALHPIKTLVI
KPSEDLSKIA ARFYDDMPWA VKTLLGFIGI DRQSDSSIVS YLLFEKTYTS ALIDLGYKDA
MEQIDELKAF FCLK
|
|---|
| |