| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_1496 |
|---|
| Symbol | |
|---|
| ID | 7088186 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS223 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011663 |
|---|
| Strand | - |
|---|
| Start bp | 1743937 |
|---|
| End bp | 1746306 |
|---|
| Gene Length | 2370 bp |
|---|
| Protein Length | 789 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 643460397 |
|---|
| Product | protein of unknown function DUF940 membrane lipoprotein putative |
|---|
| Protein accession | YP_002357424 |
|---|
| Protein GI | 217972673 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.174983 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.482942 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATAACA CTACCCATTC TAATCTGACC TTATGCAAAC TTTCCACAAT TGCGTTAGCT
CTTTTGCCTT TATTTCATGT CCAAGCGGAT GAATTTAGTT ATCCAATACT AAAAGCTTCT
CAGACAGACT TCGGTGGTGT CGGCTTAATG CAAATGCCAA CAGGCCGAAT GGCACCAGAG
GGAGAGTTTA ATTTAGCGAC AATGTACAAC TCTGAATACC AACATTTTTC AGCGTCAGTA
CAATTATTTT CGTGGTTAGA AACAACTGCA CGGTATACCC AAGTACAAGA TTTACTCTAC
AGTGATGATC CCACTTTCAG TGGTAATACT AAATACACGG ATAAAGGCCT TGATTTTAAA
GCCCGTTTAC TTGAAGAAAG TGCATGGCTT CCAGAAACCT CAGTTGGGAT TAGAGACATA
GGCGGTACAG GTTTATTTGA TGGAGAATTT ATTGCCGCAA CTAAACGTGT TGGCCCACTT
GATTTCACCT TAGGAATTGG CTGGGGCTAT ATCGGCAATA GTGGCAACCT GACATCGGAT
AAAAAAGATC TTAATTATAA CTGTGGTCGA GATACTTCAT ATGGTGGTAG CGGTGGCACA
GTCGATTATA AACGCTGGTT TAAGGGCTGC GCCGCTTTAT TCGGCGGAGT GGAATATCAA
ACGCCTTGGG AGCCTTTAAG AGTAAAAGTA GAATATGACG GCAACGATTA TCAAGCAGAC
TTCCCCGTAA CTAGGGGAGC AATTAACATG CCTCAGGATA GTAAGTTTAA CTACGGGTTA
CTCTATCGCG CAACAAGCTG GAGTGATTTT CACTTAAGCT ATGAGCGCGG TAACACGTTA
ACCTTCGGTG TGAGTCTGCA AACCAATTTC AACGACTTAC GACAAATAAA ACGCGATACT
CCAGCCGAAG AATATAAACC TGTAGCTGCA GCGCCTATGT CCAATAAAAA CATAACGCGC
GACAATGCTA ATCAAAAACT ACCATCTCAA GCATCTGAGT TGGCAGCAAC CTCTGTACAA
AAACAATTTG TTGCACCTAT TGCCGAGAAA GAGTCGTTGA AATTGGCGAC GAATACTATC
AACGCACAAA TGCTAGACCA AACTGATTGG AAAAAAGTAG CTAAAGAGCT AGGGAAAATT
GCAGGCTACA ATAATCCTAA AATCTATCTT GATAGCCACA GCGTGACTGT TGTTGCGGAT
CAAATAAAGT ATATGGATCG TAAACAGGCT CACAAAAGGG CAGCGACTAT ACTGGCAAAT
AACACCAATA AAGATGTTAT TACCGAGTAT CGTCTGATAG AAACCCATTA CAACCAGCCT
ATTACAGAAA CCCGTATCGA CGCTGGTAAA TTTGCACAAG TCGCTACCTA CGGGTATATC
AATGCCGATA TAACTGATAG CACTGAAGTC AGTGTACCTA TGTATCCAAG AGGAACATTA
GTCACTCGAA CCGATGAAGA TTGGTTAGAT AAGTTAAGTT TCGATTTCTC GCCGACTATG
GTGCAATCTT TTGGGGGTTC TGAAGGCTTC TATATGTTCA ACGTTGGTGT CACAGGAAAT
TCTGCGTATC GATTTAGTGA TAATTTAGAA CTATCTGGGT CGCTATATCT TAATCTGTAT
GATAACTATG ATAAATTCTT ATATGACGTG CCGCCTGATG GTACCGATTT AAAGCGAGTT
AGAACACTGA TCCGCCAGTA TGTTCAAAAT TCGACAGTCA GAATGACGAA CTTACAATTA
ACGTGGATGG ATAATCTGAG TGATAACATC TATTACCAAG CCTATGGCGG CTATTTGGAA
ATGATGTATG GCGGTGTTGG TTCAGAGTTC CTCTATCGTC CACTGAATAG CCAATGGGCC
TTCGGGATTG ATGCAAGTTA CGCGAAGCAA CGGGATCCCG ATAATTCATT CGGTTTCTTT
AAGGATGAAC ATCAATATGA TGTTAGTTCA GCCCGTAACT TTAGAGTGCA GACAGGGGTG
ATGACTGGAA ATGCGACCGT ATATTACCAG CCTAACTGGC TGCCTAATAC CTTGCTTAAA
GTTAGTGTAG GTCAATACCT AGCTGAAGAT AAAGGGGTCA CAGTCGACTT ATCAAAACAG
TTTGATAGTG GTGTGATTAT TGGTGCATTT GCGACTAAAA CTAACCTGTC TGCAGACGAA
TATGGTGAGG GTAGCTTTAC AAAAGGGTTC TATATCTCAG TCCCATTCGA TTTAATGACG
ATTAAGCCGA CACAAAATCG TGCCTTCCTT TCATGGATGC CATTAACCCG TGACGGTGGA
CAAATGTTGG GGCGCAAGTA CAATTTATTT GATGTCACTG ATGCTCGCAC ACCTTGGTAC
ACCAAACCCA TTATCGAAGA TACTAAATAG
|
|---|
| Protein sequence | MNNTTHSNLT LCKLSTIALA LLPLFHVQAD EFSYPILKAS QTDFGGVGLM QMPTGRMAPE
GEFNLATMYN SEYQHFSASV QLFSWLETTA RYTQVQDLLY SDDPTFSGNT KYTDKGLDFK
ARLLEESAWL PETSVGIRDI GGTGLFDGEF IAATKRVGPL DFTLGIGWGY IGNSGNLTSD
KKDLNYNCGR DTSYGGSGGT VDYKRWFKGC AALFGGVEYQ TPWEPLRVKV EYDGNDYQAD
FPVTRGAINM PQDSKFNYGL LYRATSWSDF HLSYERGNTL TFGVSLQTNF NDLRQIKRDT
PAEEYKPVAA APMSNKNITR DNANQKLPSQ ASELAATSVQ KQFVAPIAEK ESLKLATNTI
NAQMLDQTDW KKVAKELGKI AGYNNPKIYL DSHSVTVVAD QIKYMDRKQA HKRAATILAN
NTNKDVITEY RLIETHYNQP ITETRIDAGK FAQVATYGYI NADITDSTEV SVPMYPRGTL
VTRTDEDWLD KLSFDFSPTM VQSFGGSEGF YMFNVGVTGN SAYRFSDNLE LSGSLYLNLY
DNYDKFLYDV PPDGTDLKRV RTLIRQYVQN STVRMTNLQL TWMDNLSDNI YYQAYGGYLE
MMYGGVGSEF LYRPLNSQWA FGIDASYAKQ RDPDNSFGFF KDEHQYDVSS ARNFRVQTGV
MTGNATVYYQ PNWLPNTLLK VSVGQYLAED KGVTVDLSKQ FDSGVIIGAF ATKTNLSADE
YGEGSFTKGF YISVPFDLMT IKPTQNRAFL SWMPLTRDGG QMLGRKYNLF DVTDARTPWY
TKPIIEDTK
|
|---|
| |