Gene Sbal223_1480 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal223_1480 
Symbol 
ID7087533 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS223 
KingdomBacteria 
Replicon accessionNC_011663 
Strand
Start bp1726978 
End bp1728015 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content39% 
IMG OID643460383 
Productpolysaccharide biosynthesis protein CapD 
Protein accessionYP_002357410 
Protein GI217972659 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1086] Predicted nucleoside-diphosphate sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0141626 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.282035 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTGGTA ATAAAAAGTT ATTAATTACG GGTGGTACAG GTTCATTCGG TAACGCTGTG 
CTGAAGCGTT TTTTGGATAC GGATATTGCT GAAATACGTA TTTTTTCTCG TGATGAAAAG
AAACAAGATG ATATGCGTAA GATATATCAT CATCCAAAGC TTAAGTTCTA TATCGGAGAT
GTACGAGATT ATAGCAGTAT TTTAAATGCT ACTCGTGGTG TTGATTTTAT TTATCATGCA
GCAGCTTTAA AGCAAGTGCC TAGTTGCGAA TTTTATCCAA TGGAAGCAGT AAAAACTAAT
GTATTAGGCA CAGAGAATGT GCTTGAAGCG GCAATTCAAA ATGAAGTAAA GCGAGTAGTG
TGCTTAAGTA CTGATAAAGC GGTGTATCCC ATCAATGCCA TGGGAATATC CAAGGCGATG
ATGGAAAAAG TTATTGTTGC TAAATCGCGT AATGTTGATC CTGCAAAAAC CGTAATTTCT
GCGACTCGCT ATGGCAATGT TATGGCTTCA CGAGGTTCAG TGATCCCGCT TTTCTTGCGT
CAGATTCTAA ATGGTCAACC GTTAACTGTC ACTGATCCAA ATATGACTCG CTTTATGATG
ACGTTGAATG ATGCTGTCGA TTTGGTATTA CACGCATTTG AACATGGTTC TAATGGTGAT
ATTTTTGTGC AAAAGGCACC TGCTGCTACT ATCGACGTGT TAGTCAAGGC GTTGCTGCAA
ATTACCGGCA AACTTAACCA TCAAGTGAAT ACCATCGGTA CCCGTCATGG TGAAAAGCTC
TATGAAGCTT TATGTAGTCG TGAAGAGATG TTTGTCGCTG AAGACCAAGG TGGTTACTAC
CGAATTCCTT CAGACAACCG GGATCTAAAT TACTCTAAGT ATAATGATGA AGGTGAAAAA
GATCTGTCTG TTATTGAGGA TTACAATTCA CACAACACTG AGCGATTAGA TGTGAATGGA
ATGGTTAAAC TGCTACATAA ACTGGATTTT ATAGCTGCTA TTGAGGCGGG AAGTTTAGTC
GTTCCAGAGG GTGTATAA
 
Protein sequence
MFGNKKLLIT GGTGSFGNAV LKRFLDTDIA EIRIFSRDEK KQDDMRKIYH HPKLKFYIGD 
VRDYSSILNA TRGVDFIYHA AALKQVPSCE FYPMEAVKTN VLGTENVLEA AIQNEVKRVV
CLSTDKAVYP INAMGISKAM MEKVIVAKSR NVDPAKTVIS ATRYGNVMAS RGSVIPLFLR
QILNGQPLTV TDPNMTRFMM TLNDAVDLVL HAFEHGSNGD IFVQKAPAAT IDVLVKALLQ
ITGKLNHQVN TIGTRHGEKL YEALCSREEM FVAEDQGGYY RIPSDNRDLN YSKYNDEGEK
DLSVIEDYNS HNTERLDVNG MVKLLHKLDF IAAIEAGSLV VPEGV