Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_1480 |
Symbol | |
ID | 7087533 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | + |
Start bp | 1726978 |
End bp | 1728015 |
Gene Length | 1038 bp |
Protein Length | 345 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 643460383 |
Product | polysaccharide biosynthesis protein CapD |
Protein accession | YP_002357410 |
Protein GI | 217972659 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1086] Predicted nucleoside-diphosphate sugar epimerases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0141626 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.282035 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTGGTA ATAAAAAGTT ATTAATTACG GGTGGTACAG GTTCATTCGG TAACGCTGTG CTGAAGCGTT TTTTGGATAC GGATATTGCT GAAATACGTA TTTTTTCTCG TGATGAAAAG AAACAAGATG ATATGCGTAA GATATATCAT CATCCAAAGC TTAAGTTCTA TATCGGAGAT GTACGAGATT ATAGCAGTAT TTTAAATGCT ACTCGTGGTG TTGATTTTAT TTATCATGCA GCAGCTTTAA AGCAAGTGCC TAGTTGCGAA TTTTATCCAA TGGAAGCAGT AAAAACTAAT GTATTAGGCA CAGAGAATGT GCTTGAAGCG GCAATTCAAA ATGAAGTAAA GCGAGTAGTG TGCTTAAGTA CTGATAAAGC GGTGTATCCC ATCAATGCCA TGGGAATATC CAAGGCGATG ATGGAAAAAG TTATTGTTGC TAAATCGCGT AATGTTGATC CTGCAAAAAC CGTAATTTCT GCGACTCGCT ATGGCAATGT TATGGCTTCA CGAGGTTCAG TGATCCCGCT TTTCTTGCGT CAGATTCTAA ATGGTCAACC GTTAACTGTC ACTGATCCAA ATATGACTCG CTTTATGATG ACGTTGAATG ATGCTGTCGA TTTGGTATTA CACGCATTTG AACATGGTTC TAATGGTGAT ATTTTTGTGC AAAAGGCACC TGCTGCTACT ATCGACGTGT TAGTCAAGGC GTTGCTGCAA ATTACCGGCA AACTTAACCA TCAAGTGAAT ACCATCGGTA CCCGTCATGG TGAAAAGCTC TATGAAGCTT TATGTAGTCG TGAAGAGATG TTTGTCGCTG AAGACCAAGG TGGTTACTAC CGAATTCCTT CAGACAACCG GGATCTAAAT TACTCTAAGT ATAATGATGA AGGTGAAAAA GATCTGTCTG TTATTGAGGA TTACAATTCA CACAACACTG AGCGATTAGA TGTGAATGGA ATGGTTAAAC TGCTACATAA ACTGGATTTT ATAGCTGCTA TTGAGGCGGG AAGTTTAGTC GTTCCAGAGG GTGTATAA
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Protein sequence | MFGNKKLLIT GGTGSFGNAV LKRFLDTDIA EIRIFSRDEK KQDDMRKIYH HPKLKFYIGD VRDYSSILNA TRGVDFIYHA AALKQVPSCE FYPMEAVKTN VLGTENVLEA AIQNEVKRVV CLSTDKAVYP INAMGISKAM MEKVIVAKSR NVDPAKTVIS ATRYGNVMAS RGSVIPLFLR QILNGQPLTV TDPNMTRFMM TLNDAVDLVL HAFEHGSNGD IFVQKAPAAT IDVLVKALLQ ITGKLNHQVN TIGTRHGEKL YEALCSREEM FVAEDQGGYY RIPSDNRDLN YSKYNDEGEK DLSVIEDYNS HNTERLDVNG MVKLLHKLDF IAAIEAGSLV VPEGV
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