Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_1468 |
Symbol | |
ID | 7087521 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | - |
Start bp | 1711122 |
End bp | 1712627 |
Gene Length | 1506 bp |
Protein Length | 501 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 643460371 |
Product | amino acid/peptide transporter |
Protein accession | YP_002357398 |
Protein GI | 217972647 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3104] Dipeptide/tripeptide permease |
TIGRFAM ID | [TIGR00924] amino acid/peptide transporter (Peptide:H+ symporter), bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00129299 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGTAG CAAAACCACA AGGAACGATG CTTGGGCATC CTAAGGGATT GTTCCTGCTG TTTACAACAG AACTTTGGGA ACGTTTTAGT TATTATGCAA TGCGCGCCAT TTTGGTACTT TATCTAGTCG ATAAAGTGCA GAGTGATGGC GGGCATGGTC TAGGTTGGAC TCAAGCTGAA GCATTATCGC TTTATGGTAC TTTCACAGGG TTAGTCTACT TAACGCCACT TATCGGTGGC TGGTTAGCTG ATAACGTACT GGGTCAACGT AAAGCCATTT ATTTTGGTGG CGCATTAATG GCTGCGGGTC AATTCTTACT TGCCGCGCCG CACAGTTGGA TCCCAGGTTT AGAAACAACT GTGTTCTATA TTGGTTTGGG TACTCTCATT CTGGGTAACG GTTTATTCAA GCCAAACATA TCCACTATGG TGGGTGATCT TTACGAAGAA GGCGATCACC GTCGTGATGG CGCATTTACC ATTTTCTACA TGGGCATCAA CTTAGGTGCT GCCCTGTCAG GCTTTATAGT CGCCTGGGCT TATACTAGCT TCGGACACGC TACTATCGTT GACGGACAAG AAGTGTTTGT TAACAACTGG CAAGCAGGTT TCTTCTGTGC CGGTGTTGGT ATGATTTTCT CTTTAATCAT CCAATTTTTG TTCGCACAGA AGTATTTAGG CGATATCGGC AGAGTGCCAG CCGCTAAGCT TGAAAAGCAA AAAGCGGAAG AGAAAGGTGA AGTACGTAAA GAACCTCTGA CCAAAGTTGA ACGTGACCGT ATTAAAGTCA TCATGGTAAT GGGTTTGTTC ACAATTATAT TCTGGGCTGG TTTCGAACAA GCTGGCGGTT TAATGAACTT GTTCACTAAC GAGTTCACCG ATCGCATGGT CGGTAGCTTT GAAGTCCCAA CAACATGGTT CCAATCATTA AACGCTATCT TTATCGTATT ATTTGCACCT GTGATTGCTT CTATCTGGAT CCGTTTAGGT AAGAATGAAC CTAACTCTCC AGTTAAATTT GCGCTTGGTC TGTTCTTACT CGCGATCGGT TTCCTATTCA TGATAGGTGC TGTAATGCAA ATGGGCGGTG ATGCATCGGT TAAATCGAGC ATGTGGTGGT TAGTGGGCGC TTATTTCTTC CACACTATGG GTGAGCTTTG CTTATCACCT ATCGGTTTAT CTATGGTGAC TAAGTTAGCA CCTCTGCGTA TCGCATCTTT GATGATGGGA GCTTGGTTCC TATTCGTTGC TGCCGCCAAC AAAATTGGCG GTGTGGTTGG CTCATTCATC GGCCATGGCG GTGCAAAAGA AGAACAACTG GCAAATGCAA TGGCGATCTT CTCTGGCATT GCCATCACAG CAGCTCTTTC AGGCATTATT CTGTATTTTA TGGCTGATAA ATTAGTGGAC TGGATGCATG GCGCTGAAAG CAAACATCAG ACTGAAGCTG AAATATTAGA AAGTGAAATT GCTGTAACTG CTGAGCATGA AGCAATAAAA CGCTAA
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Protein sequence | MSVAKPQGTM LGHPKGLFLL FTTELWERFS YYAMRAILVL YLVDKVQSDG GHGLGWTQAE ALSLYGTFTG LVYLTPLIGG WLADNVLGQR KAIYFGGALM AAGQFLLAAP HSWIPGLETT VFYIGLGTLI LGNGLFKPNI STMVGDLYEE GDHRRDGAFT IFYMGINLGA ALSGFIVAWA YTSFGHATIV DGQEVFVNNW QAGFFCAGVG MIFSLIIQFL FAQKYLGDIG RVPAAKLEKQ KAEEKGEVRK EPLTKVERDR IKVIMVMGLF TIIFWAGFEQ AGGLMNLFTN EFTDRMVGSF EVPTTWFQSL NAIFIVLFAP VIASIWIRLG KNEPNSPVKF ALGLFLLAIG FLFMIGAVMQ MGGDASVKSS MWWLVGAYFF HTMGELCLSP IGLSMVTKLA PLRIASLMMG AWFLFVAAAN KIGGVVGSFI GHGGAKEEQL ANAMAIFSGI AITAALSGII LYFMADKLVD WMHGAESKHQ TEAEILESEI AVTAEHEAIK R
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