Gene Sbal223_1439 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal223_1439 
SymbolfliH 
ID7087492 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS223 
KingdomBacteria 
Replicon accessionNC_011663 
Strand
Start bp1681775 
End bp1682791 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content46% 
IMG OID643460342 
Productflagellar assembly protein H 
Protein accessionYP_002357369 
Protein GI217972618 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1317] Flagellar biosynthesis/type III secretory pathway protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTCCT CTAATCCGAG CGACAATAAA CCGTCAAATA AGGTCTTGAG CGACGGTGAT 
ATTGAGTTTA GTCACTGGGC ACTGCCAGAT GTGACTGAAG CCGATGACGA TTCTATCTCG
AATTTGTTCG GCCATTCGAA TCATCAAGCC GCTAAGCCGA CGACGGTTGA GAGTGTTTCT
CCGCCGACTA TGGCCGAGAT TGAGGACATT CGCGCCCAAG CTGAAGAAGA AGGGTTTGCC
GAAGGTAAAC AACAAGGTTA CGAGCAAGGG CTAGAAAAAG GTCGCTTAGA AGGCTTAGAG
CAAGGCCATA CTGAAGGGCT CGCCCAAGGG CATGAGCAAG GATTAGAAAC CGGTTTAGCT
CAAGCCAAAG TTTTACTTTC GCGGTTTGAA GCCTTATTAA CTCAATTTGA AAAGCCATTG
CAATTACTCG ATGGTGATAT TGAGCTCTCC CTACTGAACT TGAGTATGAC ATTAGCTAAA
TCAGTCATAG GTCACGAATT AAAAACCCAT CCAGAACAAG TGCTTTCGGC ATTACGCTTA
GGCATAGAGT CGCTACCGAT TAAAGAGCAA GCGGTTACTA TTCGGCTGCA TCCTGACGAT
GTGATCCTTG TCGAACAACT TTATTCCACC GCCCAACTGA CTCGTAGTAA ATGGGAACTT
GAAGTCGATC CGACGTTAAG TGCAGGCGAT TGTATTCTGA GCAGTCATCG CTCATTAGTC
GATTTAACGC TTTCATCGCG TATCGATACA GTGTTTGAGT CATTACGAAA TCAACATGCG
CATTTGAGTG ATAAACAGCA TCAACTGCAA GAGACGATTG AAGCTGAAGA TACTGCCAAA
CAAGTTACTG TGGCGCTTGA GTCTGAGCTT GATGATCAAA CGGCTGATGA CCAAGCTGTC
GATACGGTTA ACCAAGACAC TGAGGACATG CAATCTGCCT CAAACACAGG TGAGCACTTA
GATACCCAAT CGGATGCCGG AGCAGATGCA AAATCGCCAA CACCAACTGC TGAATAG
 
Protein sequence
MSSSNPSDNK PSNKVLSDGD IEFSHWALPD VTEADDDSIS NLFGHSNHQA AKPTTVESVS 
PPTMAEIEDI RAQAEEEGFA EGKQQGYEQG LEKGRLEGLE QGHTEGLAQG HEQGLETGLA
QAKVLLSRFE ALLTQFEKPL QLLDGDIELS LLNLSMTLAK SVIGHELKTH PEQVLSALRL
GIESLPIKEQ AVTIRLHPDD VILVEQLYST AQLTRSKWEL EVDPTLSAGD CILSSHRSLV
DLTLSSRIDT VFESLRNQHA HLSDKQHQLQ ETIEAEDTAK QVTVALESEL DDQTADDQAV
DTVNQDTEDM QSASNTGEHL DTQSDAGADA KSPTPTAE