| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_1437 |
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| Symbol | fliF |
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| ID | 7087490 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS223 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011663 |
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| Strand | + |
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| Start bp | 1679061 |
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| End bp | 1680743 |
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| Gene Length | 1683 bp |
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| Protein Length | 560 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 643460340 |
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| Product | flagellar MS-ring protein |
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| Protein accession | YP_002357367 |
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| Protein GI | 217972616 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1766] Flagellar biosynthesis/type III secretory pathway lipoprotein |
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| TIGRFAM ID | [TIGR00206] flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF) |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTGTCG GATCCAATTC CGACTTAGCT GACCAAGGTG TCCAGCAAGA ACATAAGTCA
GGAATGATGG GAAACCTTGG CGGTGTCGAT ATGATGCGCC AAGTAACTAT GATTTTAGCC
TTGGCGATTT GTTTGGCCTT AGCCGTATTT GTCATGCTGT GGGCACAGGA GCCTGAGTAT
CGTCCATTGG GTAAAATGGA AACTCAGGAA ATGGTTCAAG TGTTAGATGT GCTTGATAAA
AATAAAGTTA AGTATCAAAT CGACGTGGAC GTGATTAAAG TCCCCGAAGA TAAATATCAA
GAAGTGAAAA TGATGCTAAG CCGCGCAGGC GTTGACAGCC CTGCGGCCAG TCAAGATTTC
TTGAATCAAG ACAGCGGCTT TGGTGTCAGC CAACGTATGG AGCAAGCCCG TCTTAAGCAC
AGCCAAGAAG AAAACCTTGC CCGTGCAATT GAGCAACTAC AAAGTGTTAG CCGCGCAAAA
GTGATCCTCG CGTTACCTAA AGAAAACGTC TTTGCCCGCA ATGCCTCAAA ACCAAGTGCG
ACTGTGGTTA TCAATACCCG TCGTGGCGGT TTAGGCCAAG GTGAAGTCGA CGCTATCGTT
GATATCGTTG CTTCTGCAGT ACAAGGTTTA GAACCATCAC GGGTGACTGT GACTGACTCT
AACGGCCGTT TATTAAACTC AGGTAGCCAA GATGGCGCGT CTGCGACAGC CCGTCGCGAG
CTTGAACTAG TACAGCAAAA AGAAGCAGAG TATCGCACTA AGATTGAATC GATTTTGGTA
CCTATCTTAG GTCCTGATAA TTTCACCTCT CAAGTCGATG TCAGCATGGA CTTTACTGCG
GTCGAGCAAA CTTCTAAGCG TTATAACCCC GATTTACCGT CTTTACGCAG CGAAATGACC
GTTGAAAATA ATACCACTGG CGGATCTTCA GGTGGGATCC CTGGGGCGCT ATCGAATCAA
CCGCCAATGG AATCGAACAT TCCGCAAGAT GCGACTAAAG CGACTGAGTC TGCCACTGCA
GGTAATTCTC ACCGTGAAGC AACCCGTAAT TTTGAGTTAG ATACTACGAT TAGCCATACC
CGTCAGCAAG TTGGCGCCGT TCGCCGCATT AGTGTGTCGG TTGCGGTGGA CTTTAAACCC
GGTGCTGCCG GAGAAAATGG TCAAGTGGCG CGTGTTGCCC GTACTGAACA AGAGCTGACC
AATATCCGTC GTTTACTCGA AGGTGCCGTA GGTTTTAGCT CGCAACGGGG TGATGTGTTA
GAAGTGGTAA CGGTTCCCTT TATGGATCAA TTGGTTGAAG ACTTGCCAGC ACTAGAACTG
TGGGAACAAC CTTGGTTCTG GCGTGCGATT AAGCTCGGTA TTGGTGCGCT AGTGATTCTG
GTACTGATTT TAGCTGTGGT ACGGCCTATG CTGAAACGCT TAATCTATCC TGACAGTGTG
AATATGCCTG AGGATGGCAG ATTAGGTAAC GAACTGGCCG AAATTGAGGA CCAGTACGCG
GCTGATACGC TAGGGATGCT CAATACCCAA GAGGCGGAAT ACAGTTATGC CGATGATGGT
TCAATTCATA TCCCTAATTT GCACAAAGAT GATGATATGA TTAAAGCTAT CCGTGCGCTC
GTGGCTAATG AGCCTGAGCT CTCTACTCAA GTCGTGAAAA ACTGGTTACA AGACAATGGC
TGA
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| Protein sequence | MIVGSNSDLA DQGVQQEHKS GMMGNLGGVD MMRQVTMILA LAICLALAVF VMLWAQEPEY
RPLGKMETQE MVQVLDVLDK NKVKYQIDVD VIKVPEDKYQ EVKMMLSRAG VDSPAASQDF
LNQDSGFGVS QRMEQARLKH SQEENLARAI EQLQSVSRAK VILALPKENV FARNASKPSA
TVVINTRRGG LGQGEVDAIV DIVASAVQGL EPSRVTVTDS NGRLLNSGSQ DGASATARRE
LELVQQKEAE YRTKIESILV PILGPDNFTS QVDVSMDFTA VEQTSKRYNP DLPSLRSEMT
VENNTTGGSS GGIPGALSNQ PPMESNIPQD ATKATESATA GNSHREATRN FELDTTISHT
RQQVGAVRRI SVSVAVDFKP GAAGENGQVA RVARTEQELT NIRRLLEGAV GFSSQRGDVL
EVVTVPFMDQ LVEDLPALEL WEQPWFWRAI KLGIGALVIL VLILAVVRPM LKRLIYPDSV
NMPEDGRLGN ELAEIEDQYA ADTLGMLNTQ EAEYSYADDG SIHIPNLHKD DDMIKAIRAL
VANEPELSTQ VVKNWLQDNG
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