| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_1418 |
|---|
| Symbol | flgD |
|---|
| ID | 7087471 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS223 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011663 |
|---|
| Strand | + |
|---|
| Start bp | 1659417 |
|---|
| End bp | 1660187 |
|---|
| Gene Length | 771 bp |
|---|
| Protein Length | 256 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 643460321 |
|---|
| Product | flagellar basal body rod modification protein |
|---|
| Protein accession | YP_002357348 |
|---|
| Protein GI | 217972597 |
|---|
| COG category | [N] Cell motility |
|---|
| COG ID | [COG1843] Flagellar hook capping protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 47 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCCTCA TTAATCAAAT TAACCAAGCA TCGGCGCAGA CGGCTCAAAA TAAGAGTCAG
TCAAATGCTG TTACGACCAA TTCATCAACC AGCTCAACGG GCAATCCGTT TCTTGATGGC
ATACGTCTGC CAAAAGATTC GATTGTACCG GAAGCGAAAA GCCAACAGTT AACTCAAGAT
GATTTTTTCT CGTTATTAAG CCAACAGTTA TCGATGCAGG ACCCTTTTAA GCCTGTTGAC
AACGATCAAA TGATTGCGCA GATGGCATCA TTTTCGACGG TTGATGGTAT CGGCAAGTTA
AATGATGAAA TTGTTAACTT AAACAGTGTC ATGACGTCGA GCCAAGCACT GCAGGCATCG
GGACTCGTTG GTCGTAAGGT ATTGATTCCA ACCGATACAG GCAATATTTC AGCAGAAAGC
CCAACGATGA AAGGTGTGGT CAGTACCCCT GATAAAATTC CAGAGATTAC TGTGCGTATC
GAAGATGAGA AGGGCCAAGT TGTCACAACC TTTAAAGTCG ATGGTAGCGA TGGTGGTAAC
GTCGATGTGA ACTGGGATGG TTTAGATAAG AATGGCCTGC CAGTGGTCGC AGGTAACTAT
ACGATTAAGG CGAGTGGTTT AGTGGATGGG AAATCCCAAG AGCTGCCCGT TTCAACCTAT
GCTCATGTGA GTAGCGTTTC TTTAGGGACG GCCAGTACCG GCGCTATTCT TAACTTGAGA
GGCGGTATGG GGATCAAGTT AACCGACGTA TTAGCTGTGT CTGAAACTTA A
|
|---|
| Protein sequence | MSLINQINQA SAQTAQNKSQ SNAVTTNSST SSTGNPFLDG IRLPKDSIVP EAKSQQLTQD
DFFSLLSQQL SMQDPFKPVD NDQMIAQMAS FSTVDGIGKL NDEIVNLNSV MTSSQALQAS
GLVGRKVLIP TDTGNISAES PTMKGVVSTP DKIPEITVRI EDEKGQVVTT FKVDGSDGGN
VDVNWDGLDK NGLPVVAGNY TIKASGLVDG KSQELPVSTY AHVSSVSLGT ASTGAILNLR
GGMGIKLTDV LAVSET
|
|---|
| |