| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_1404 |
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| Symbol | |
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| ID | 7088829 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS223 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011663 |
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| Strand | - |
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| Start bp | 1647717 |
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| End bp | 1649462 |
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| Gene Length | 1746 bp |
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| Protein Length | 581 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 643460307 |
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| Product | thiamine pyrophosphate protein domain protein TPP-binding |
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| Protein accession | YP_002357334 |
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| Protein GI | 217972583 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
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| TIGRFAM ID | [TIGR00173] 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTTTGT CCCCCATCAC AGTGGCAGCA GATGCTGTTA TCGAATTTTT GGCACATCAG
GGTATTTATG CACTCCATAA CTATCCAGGA GGAACAATCG CTCCCCTCCT CGATGCATGC
AAACGATTTG GTATTGCCGT TTATACTTCT CGTAATGAAC AAGGAGCGGG TTACGCAGCT
TTAGCTCAGG GGAAATTAAC GCAGTTACCC GGTATTGTTG CAGTGACATC GGGGCCTGGC
GTAACGAATG TGCTAACGCC TGTCGCTGAT GCCTATTTTG ATGGCATACC TATGCTGGTG
TTCACAGGAC AAGTAGGTAC GGGAGATCTC ACCGGAAGTA GGTCTGTTCG TCAATCAGGA
TTCCAAGAGG TCGATACCCC AGCCCTAATG AAGCCGATCA CTAAAGCACA GTTTCAACCC
AAAAATATTG TGGAATTATA CGAAATCCTT CCACAGGCAT GGGCTCTTGC TTTAGAAGGC
AGAAAAGGCC CCGTTTCCAT TGATTTACCA ATGGATGTAC AACGCACCGC AGTTACAGAG
CCAATCAAGC TGATTACAGC TGCATTAGCG AAAACCAATA CAGCAGAACT TGATGTATTT
GTTGATACCC TAATTGAAGC AATGAATACT TCACAAAGGC CAGTCATTAT TTGCGGTAAT
GGCATGACGA CTCCTGCATT AGTAGAAGCA TTACATAAAC TGAGAATCCA TTGGCCAGCG
GCTGTCAGTC ATAGTCTTTT GGGTATCGGA GTTCTACCCA CTGATGATAA TGGCTGTTTA
GGCTTTCATG GTCATACCGG TAGCCAAATT GCAGGTAAAG CCATTGCAGA ATCCGATTTA
TTACTGGTTT TAGGCTCTCG ATTAGATGTC CGCCAAACGG GTACGCTTAA AGCGAATTTT
GCAGCAAATG CAAAAATTTT CAGAGTTGAT ATTGATGAAG GTGAATTAGC CCACAGCCGG
ATAGCACACC ATGCAGCGGT TCATTCTGGA CTTACTGAGT TTTTCGATAC TTTATTAAAG
AATCAACACA AATTATCAGT TCCAGAACTT TCTGAATGGA ATAACACTAT CACGCAATGG
CGTGACCAAT TTAGTTGGCC ATATCCAGAA TATCCAGGTA TTGCACCAGA TAAACTACTA
AACAAACTCA GTGACAATTT ACCCGAAAGT ACTTTAGTCA CAACTGGAGT AGGTGCACAC
CAACACTGGG TTGCTAGGCA CTTCAGATTT GCACTACCGC AGCGCAAGCT TTTGACATCT
GCAGGACATG GCACTATGGG GTATGACCTC CCTACTGCTA TCGGTGCAGC TATTCACGCT
CCTGAGTCTA CAATTCTCTG CATTGCTGGG GATGGTTCGT TTCAGATGAA TATCCAAGAG
CTAGACGTTA TCAGTGAATT AGGACTTAAT ATTAAAATTC TTGTTGTCGA TAACCATAGA
TTAGGACTTG TTTCCCAGTT TCAACTGATG AATTGGGAAA CAGATACCGC ATGCGGCAAT
AAACATTCAC CCAATTTTGC CCTCATAGCC CAAGGTTACG GTATTCAAGC GATCCATTGC
TCCCAAGAAG CTGAACTAGA ACAAGCGCTC ACCGCATTCA TCGAAGCCAA AGGGGCTGTT
TTACTCCATG TAGAGATAAA TCCTCAACAC GATATTTTAC CTATGCTACT TGGTGGACAA
GCAACAGATA AGATGTGGCC ATATTTTGAT GCCCAAGGAA AGCCAAGGGG TAAGAACCAT
GACTAA
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| Protein sequence | MSLSPITVAA DAVIEFLAHQ GIYALHNYPG GTIAPLLDAC KRFGIAVYTS RNEQGAGYAA
LAQGKLTQLP GIVAVTSGPG VTNVLTPVAD AYFDGIPMLV FTGQVGTGDL TGSRSVRQSG
FQEVDTPALM KPITKAQFQP KNIVELYEIL PQAWALALEG RKGPVSIDLP MDVQRTAVTE
PIKLITAALA KTNTAELDVF VDTLIEAMNT SQRPVIICGN GMTTPALVEA LHKLRIHWPA
AVSHSLLGIG VLPTDDNGCL GFHGHTGSQI AGKAIAESDL LLVLGSRLDV RQTGTLKANF
AANAKIFRVD IDEGELAHSR IAHHAAVHSG LTEFFDTLLK NQHKLSVPEL SEWNNTITQW
RDQFSWPYPE YPGIAPDKLL NKLSDNLPES TLVTTGVGAH QHWVARHFRF ALPQRKLLTS
AGHGTMGYDL PTAIGAAIHA PESTILCIAG DGSFQMNIQE LDVISELGLN IKILVVDNHR
LGLVSQFQLM NWETDTACGN KHSPNFALIA QGYGIQAIHC SQEAELEQAL TAFIEAKGAV
LLHVEINPQH DILPMLLGGQ ATDKMWPYFD AQGKPRGKNH D
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