| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_1396 |
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| Symbol | |
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| ID | 7088821 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS223 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011663 |
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| Strand | + |
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| Start bp | 1637527 |
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| End bp | 1638522 |
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| Gene Length | 996 bp |
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| Protein Length | 331 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 643460300 |
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| Product | polysaccharide biosynthesis protein CapD |
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| Protein accession | YP_002357327 |
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| Protein GI | 217972576 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1086] Predicted nucleoside-diphosphate sugar epimerases |
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| TIGRFAM ID | [TIGR03589] UDP-N-acetylglucosamine 4,6-dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.709485 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTTGATA ACAAAACGAT TTTGATTACC GGTGGCACAG GGTCATTTGG ACAAAAATAC
ACTAAAACGA TATTAGCCAA ATATAAGCCT AAGCGCCTGA TTATTCTATC TCGCGATGAG
CTTAAACAGT ACGAAATGCA GCAGATTTAT AATGCGCCAT GCATGCGTTA CTTTATTGGT
GATGTACGTG ATGGCGATCG GTTAGAACAA GCTTTTAAAG ATGTTGATTT CGTCATTCAT
GCAGCAGCTC TAAAGCAAGT TCCTGCCGCA GAATACAACC CTATGGAATG TATCAAAACG
AACATATACG GTGCTGAAAA TGTTATTCGT GCAGCAATAT CTAATAATGT TTCGAAAGTG
ATTGCTTTAT CGACAGACAA AGCTGCCAAT CCTATTAACC TTTATGGCGC TACAAAATTG
GCATCAGATA AGCTTTTTGT TGCGGCGAAT AATATTGTTG GCTCGGGGAA GACACGTTTT
GCTGCTGTTC GTTATGGTAA TGTGGTGGGT TCTCGCGGCT CTGTAGTGCC CTTTTTTAAG
CAACTCATCG CTAATGGAGC TGATGCGTTA CCTATCACTC ATCAAGATAT GACCCGTTTT
TGGATTTCCT TGCAAGATGG TGTGGATTTT GTTCTCAAAA ACTTTGAGCG AATGCAAGGT
GGTGAAATTT TTGTGCCTAA AATTCCCTCA GTAAGAATTA CTGATCTAGC AGCTGCTTAT
GCTCCTGATT TAAAAAAAGA AATAGTAGGA ATCCGTCCAG GCGAAAAAAT GCACGAAATT
ATGTGTCCAG GAGATGATTG CCACCATACA TTAGAATTTG ATGATCATTT TGTAATAATG
CCAAGCATAA AGTTTTTTGG GCGTGAGACC GATTTTTGTA CTAATCATTT AGGTGAAAAA
GGACATCTTG TCCCACAAGG GTTTGAATAT AACTCAGGTA CAAACCCAAA GTTTCTCACC
ATTGATGAAA TCTTAGCAAT GGACAAACTT GCATGA
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| Protein sequence | MFDNKTILIT GGTGSFGQKY TKTILAKYKP KRLIILSRDE LKQYEMQQIY NAPCMRYFIG
DVRDGDRLEQ AFKDVDFVIH AAALKQVPAA EYNPMECIKT NIYGAENVIR AAISNNVSKV
IALSTDKAAN PINLYGATKL ASDKLFVAAN NIVGSGKTRF AAVRYGNVVG SRGSVVPFFK
QLIANGADAL PITHQDMTRF WISLQDGVDF VLKNFERMQG GEIFVPKIPS VRITDLAAAY
APDLKKEIVG IRPGEKMHEI MCPGDDCHHT LEFDDHFVIM PSIKFFGRET DFCTNHLGEK
GHLVPQGFEY NSGTNPKFLT IDEILAMDKL A
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