| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_1384 |
|---|
| Symbol | |
|---|
| ID | 7088809 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS223 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011663 |
|---|
| Strand | + |
|---|
| Start bp | 1621205 |
|---|
| End bp | 1622761 |
|---|
| Gene Length | 1557 bp |
|---|
| Protein Length | 518 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 643460288 |
|---|
| Product | cytochrome bd ubiquinol oxidase subunit I |
|---|
| Protein accession | YP_002357315 |
|---|
| Protein GI | 217972564 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1271] Cytochrome bd-type quinol oxidase, subunit 1 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.362762 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTGTTG AAGAGGTTGT TGAGCTATCG CGGTTGCAGT TTGCGCTGAC AGCCATGTAT
CACTTCCTGT TTGTTCCCTT GACGTTGGGG TTGGCATTTT TGCTGGCTAT CATGGAATCA
CTGTATGTGA TGACGGATAA ACAAATTTAT AAAGATATGA CTAAGTTCTG GGGTAAGTTA
TTTGGTATTA ACTTTGCCTT GGGGGTTACC ACAGGTTTGG CAATGGAATT CCAGTTTGGT
ACTAACTGGT CTTACTATTC GCATTACGTA GGGGACATCT TTGGTGCGCC TCTGGCTATT
GAAGGTTTAA TGGCCTTCTT CCTCGAATCT ACCTTCGTCG GTATGTTCTT CTTCGGTTGG
GATCGTTTCA CTAAACGTCA ACATTTAGTG GTGACTTGGT TAGTGGCCTT TGGCTCTAAC
ATGTCGGCAT TGTGGATTTT AGTGGCAAAC GGTTGGATGC AAAACCCTGT GGGTTCAGTG
TTCAATTACG AAACCATGCG CATGGAAATG ACCAGCTTCG CCGAAGTGGT GTTTAACCCT
GTTGCGCAGG TGAAGTTTGT TCACACTGTG GCTTCGGGTT ATGTCGCGGG TGCCATGTTT
GTACTGGCAA TCAGTGCTTA TTACATCCTC AAGAAACGTG ACTTACCTTT TGCCCGTCGC
TCATTCGCGA TTGCGGCAAG CTTTGGTATG GCGGCAATTC TATCGGTTAT CGTGTTAGGT
GATGAATCTG GCTATAAAGT CGGTGAAGCA CAGCGTGTTA AGTTAGCGGC GATTGAAGCT
GAATGGCACA CTGAACCTGC TCCTGCGGCC TTTACTGCGG TTGGTTTCCC AAATCAAGAA
ACCATGCACA CGGATTATGC GATCAAAATT CCTTATGCTA TGGGTATTGT GGCAACACGC
TCATTGGATG AAGAAGTCAC GGGTATCCAT GATTTGATTG CTGAGCATGA AGTGCGCATC
CGTAACGGTA TGAAAGCCTA TGCCATGTTA GTGAAGCTGC GTGCGGGTGA AGAAACACCT
GAACTGCGTG CGGCCTTCGA AGAAGCGAAA GTCGACTTAG GCTATGGTTT CTTACTGAAA
CGCTACACAG ACAAAGTGGT CGATGCCACT GAAGAGCAAA TTAAAGCAGC AGCTAAAGAT
TCTATTCCGA ACGTAGCGCC GATTTTCTGG AGCTTCCGTG TGATGGTGGG TCTAGGCTTT
ATCATGTTAT TCGTATTTGC TGCGGCATTC TGGCAAAGCA CACGTCATCA AATCGTCGAG
AAGAAATGGG TACTTAAAGC TGCACTTTAT AGCTTGCCAT TGCCTTGGAT TGCGATTGAG
TGTGGTTGGT TTGTGGCTGA GTATGGTCGT CAACCTTGGA CGATTTCTGA GGTATTACCG
ACCTTTATGT CTGCCTCAAG CTTAACGACT GGCGACTTAT GGTTCAGTAT CCTTTCTATC
ACCCTGTTCT ACACTGTGCT GCTGGTGATT GAGATGTTCT TGATGTTTAA GTTTGCCCGC
ATTGGTCCGA GCAGTTTAAA AACTGGTCGT TATCATTTCG AGAAACTAGA AGCCTAA
|
|---|
| Protein sequence | MIVEEVVELS RLQFALTAMY HFLFVPLTLG LAFLLAIMES LYVMTDKQIY KDMTKFWGKL
FGINFALGVT TGLAMEFQFG TNWSYYSHYV GDIFGAPLAI EGLMAFFLES TFVGMFFFGW
DRFTKRQHLV VTWLVAFGSN MSALWILVAN GWMQNPVGSV FNYETMRMEM TSFAEVVFNP
VAQVKFVHTV ASGYVAGAMF VLAISAYYIL KKRDLPFARR SFAIAASFGM AAILSVIVLG
DESGYKVGEA QRVKLAAIEA EWHTEPAPAA FTAVGFPNQE TMHTDYAIKI PYAMGIVATR
SLDEEVTGIH DLIAEHEVRI RNGMKAYAML VKLRAGEETP ELRAAFEEAK VDLGYGFLLK
RYTDKVVDAT EEQIKAAAKD SIPNVAPIFW SFRVMVGLGF IMLFVFAAAF WQSTRHQIVE
KKWVLKAALY SLPLPWIAIE CGWFVAEYGR QPWTISEVLP TFMSASSLTT GDLWFSILSI
TLFYTVLLVI EMFLMFKFAR IGPSSLKTGR YHFEKLEA
|
|---|
| |