| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_1356 |
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| Symbol | |
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| ID | 7088781 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS223 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011663 |
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| Strand | - |
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| Start bp | 1585853 |
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| End bp | 1587607 |
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| Gene Length | 1755 bp |
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| Protein Length | 584 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 643460260 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_002357287 |
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| Protein GI | 217972536 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.786537 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.00000000000388708 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | TTGACAAGAA AACCAATGAC AAGCACTAAA CCGCTGAAAA GCCTAAAACA AAAAATAACC
TTAGCCTTCT ATATCATAGT GGGCATGGCG CTGTTTAATG GTGTCGTCGC CATACTGCTG
TCACAGCAAC TGAAATCAGA AATTGAGCAT TTAGTGGGAG TGGATGTTGT TAAAGTCACC
ACTGCGCTGC AACTGGCAAA AAACAGTGAA AAACTGCAAA TCATCACAGC ACGTTTAAAT
CATTATGATA ATGAACAGCA AAGACTTCGC CTATTGAGTG AGCTCTCGGC GCAGTGGGAA
CTATTAATTA ATGACTCCCG ATTACTGGCC TTAATTGAAA CCTCTACTGT CAGTAAGCAA
GAATTGAATC ACGCGTTAGA TATTCAACTG TATTATTTAC AACAGCTGCC ATTACTTGCC
GAGTTAACCG ATTCCGCCCT ACAAGCCAAT TTACAAGCAA CAAATATTCA AGCCAATTTA
ACCTCAATGG CATCGGGATT TACCGATGAA ATGCAAACCC AATTTCACAG CATCAATGCC
GATTCAGAGC GTCAGCTTAA GCTGAAAAAT TTTGACAAAA TTGCGATGAA TATCAATACC
AACCAGCAAT TGTCTCAATT TAGTCATTTG GGGGAACACT TATTTACCCG CCTATCTCAG
GTAAAAATTA TCGACAATCT GGTTGAGCTT AACCGCACCC AAAGAGAAGC AATGCGACTA
CTGTTAAATA TGGAGGCGAT TCTCGAGGGC GTTAGCGGGG ATACCAGTTT ATATTTCAAT
TTGTTATCGC AAATAAAACA GACCATGGTC GGTGAAGATA ACCTGTTTGA ACTTTCACGC
AAGGCCATTA AAAGCACGCA TATCGCCAAT GCGCATTTAG AGTACCAAGC CGATGCAGCG
CAAATCGTCG CGACCTATAC CCAAAATCTG GTCAACCAAG TCGAGAATGA AATCCAACAA
ACGGGCGGCG AACTTAAAAG CGACAGCACC GCATTTATCA TATTGATTTT CTGCAGTGGT
ATTCTGTATT GCTTCTTCAT CTGGCTCACC AGCTGGCACT TTATCACTAA GGGCATTATC
AAGCCTGTGA TGGCGACGCG AGATGCCATG AACGCTATCG CCAATGAAAA GCTCGACACC
CACATGCCGG TCACTGACAA CCTAGAACTG CAGCAAATGG TGAACTCTTT AGAAACCCTA
AAAAGCTATG CGGCCCAGGT TAAAGGAATG GCGGAAACTG ACGGACTAAC AGGCTGCTAC
AACCGCCGTT ATTTAGATAT ACAACTCCAA AAAGAACTCG AGTATGCAAG GGATCACAAT
ATGCCCCTTG GCATCATTCT GTTTGATATT GATAATTTTA AACAATTTAA CGACAGGTAC
GGCCATGTCG CCGGTGATCA ATGTCTGAAA AACATTGTTA ACGCCGCTAA ATCCATCTTA
AAACGCCCAA CTGACATGCT CGCCCGCTAT GGCGGTGAAG AATTTATGAT AGTGTTGCCA
TCGAGTCCTC TCGAGGAGGT CTATCAATTT GCCGAACGAT TGCGGGAGAA AATCATCAGC
CTAGAAATTC CCCATGAAGA CTCTCCCCAT GCGGGCATAC TTACCATCAG CGCCGGGATT
ACTTGCTGGC AACTACCGCA ACAGCTGGAT GCAAATAGTT TAATTAATCG CGCCGATGAA
GCCCTCTATC ATGCAAAACT GACGGGGCGT AACCGTACCG AAGCCCTTCT CGGCCAACCC
ATTCGCTATT CCTAA
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| Protein sequence | MTRKPMTSTK PLKSLKQKIT LAFYIIVGMA LFNGVVAILL SQQLKSEIEH LVGVDVVKVT
TALQLAKNSE KLQIITARLN HYDNEQQRLR LLSELSAQWE LLINDSRLLA LIETSTVSKQ
ELNHALDIQL YYLQQLPLLA ELTDSALQAN LQATNIQANL TSMASGFTDE MQTQFHSINA
DSERQLKLKN FDKIAMNINT NQQLSQFSHL GEHLFTRLSQ VKIIDNLVEL NRTQREAMRL
LLNMEAILEG VSGDTSLYFN LLSQIKQTMV GEDNLFELSR KAIKSTHIAN AHLEYQADAA
QIVATYTQNL VNQVENEIQQ TGGELKSDST AFIILIFCSG ILYCFFIWLT SWHFITKGII
KPVMATRDAM NAIANEKLDT HMPVTDNLEL QQMVNSLETL KSYAAQVKGM AETDGLTGCY
NRRYLDIQLQ KELEYARDHN MPLGIILFDI DNFKQFNDRY GHVAGDQCLK NIVNAAKSIL
KRPTDMLARY GGEEFMIVLP SSPLEEVYQF AERLREKIIS LEIPHEDSPH AGILTISAGI
TCWQLPQQLD ANSLINRADE ALYHAKLTGR NRTEALLGQP IRYS
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