| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_1350 |
|---|
| Symbol | |
|---|
| ID | 7088775 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS223 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011663 |
|---|
| Strand | - |
|---|
| Start bp | 1579659 |
|---|
| End bp | 1580486 |
|---|
| Gene Length | 828 bp |
|---|
| Protein Length | 275 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 643460254 |
|---|
| Product | MscS Mechanosensitive ion channel |
|---|
| Protein accession | YP_002357281 |
|---|
| Protein GI | 217972530 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0668] Small-conductance mechanosensitive channel |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.0000676183 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 1 |
|---|
| Fosmid unclonability p-value | 0.0000000000523866 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAACC TTGAAGGTTT ATTAAAGCAA GCACCGGATC TGATTGTGAC TTATGGCTTA
AAAGTTTTAT TTGCCATTAT CATTTTCTTT GTTGGTAAAT ACTTTGCCGG CGTAGCGCAA
AAGCTGGTTC GTAAATTACT GAACAGCCGT AAAGTTGATC CGACCGTTGT TTCATTTATC
GCAAACCTCG CTTGGGCAAT TGTGTTTGTT TTCGCAGTGA TTGCCACCTT AGGCCAAATT
GGCGTACAAA CCGCATCATT GGTCGCCGTT ATCGGTGCCG CTGGTTTAGC GGTGGGTTTA
GCGCTACAGG GTTCTCTGTC TAACTTCGCA TCGGGCGTAT TAATGGTGTT ATTCCGCCCT
TGCCGCGTTG GTGACTATAT TGAAGCCGCT GGCATTGCAG GTACTGTTGA TGAAATCACC
ATATTCTCAA CCAAGCTTCG TACACCAGAT AACAAGGTTA TTGTGGCGCC TAATTCATCC
ATCATGAATG GCACTATCAC TAACTATTCG GCAATGGATA CTCGCCGTAT CGATTTAGTG
ATTGGCGTAT CTTATTCTGC CGATATCGCA CTCACGAAGA AAATCTTAAC TGAGATTTTA
GACAACAACC AATATGTGTT AAAAGATCCA TCATATACAG TTGGACTGGC TGAATTAGCG
AACTCTTCAA TTAATTTCGT GGTTCGCCCT TGGGTAAAAA CGGCTGATTA TTGGACGGCT
CGTTTCCAAC TGCTTGAGCA AATCAAAAAT GCATTAGATG CAGCAGATAT CGGTATTCCA
TTCCCACAAA TGGATATTCA TGTCAAAGAA TTGCCACTCA GCAAATAA
|
|---|
| Protein sequence | MENLEGLLKQ APDLIVTYGL KVLFAIIIFF VGKYFAGVAQ KLVRKLLNSR KVDPTVVSFI
ANLAWAIVFV FAVIATLGQI GVQTASLVAV IGAAGLAVGL ALQGSLSNFA SGVLMVLFRP
CRVGDYIEAA GIAGTVDEIT IFSTKLRTPD NKVIVAPNSS IMNGTITNYS AMDTRRIDLV
IGVSYSADIA LTKKILTEIL DNNQYVLKDP SYTVGLAELA NSSINFVVRP WVKTADYWTA
RFQLLEQIKN ALDAADIGIP FPQMDIHVKE LPLSK
|
|---|
| |