Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_1348 |
Symbol | |
ID | 7088773 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | + |
Start bp | 1578226 |
End bp | 1578867 |
Gene Length | 642 bp |
Protein Length | 213 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 643460252 |
Product | protein of unknown function UPF0126 |
Protein accession | YP_002357279 |
Protein GI | 217972528 |
COG category | [S] Function unknown |
COG ID | [COG2860] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.028372 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.0000000000418622 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCATGAGA CGCAGATTAT TGGATTACTT TGGCTGATTG GTATCATTGC CGAGGCTATG ACGGGCGCTC TGGCGGCGGG TCGCAAGCAG ATGGATTTGT TTGGTGTAGT GATCATTGGC TGCGCAACGG CGATTGGTGG CGGCACACTA AGGGACATGA TGCTCGGCAA TTACCCCTTA ATTTGGGTTG AGCACGTGAA TTACCTTATT GCGATTGCAT TCGCTTCTTT GCTCACTGTC GCTATCGCCC CTGTGATGCG TTATCTATCT AAGTTGTTTT TAGCTATCGA TGCTTTAGGG TTAGCCGTGT TCTCTATCGT GGGCGCGCAG AAGACCTTGA TGCTGGGATT TAGCCCAACG ATTGCCGTGG TGATGGGATT GGTGACGGGC GTTTTTGGTG GCGTTATCCG CGATATCCTG TGTAATCAAG TGCCTTTGAT TTTTAAGAAA GAACTCTACG CGGTGATTTC ACTACTGACG GCAGGCTTGT ATATCGTCCT AAAAGCCTAT CAATTAACCG AGTGGATTAA TCTGGTTATT TGTCTGAGCG TTGGTTTTAG CCTGCGGATG TTAGCGCTGC GCTATCATTG GTCTATGCCG ACCTTTGATT ATCAGGCCAA TGGCGATCAG CACACACATT AG
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Protein sequence | MHETQIIGLL WLIGIIAEAM TGALAAGRKQ MDLFGVVIIG CATAIGGGTL RDMMLGNYPL IWVEHVNYLI AIAFASLLTV AIAPVMRYLS KLFLAIDALG LAVFSIVGAQ KTLMLGFSPT IAVVMGLVTG VFGGVIRDIL CNQVPLIFKK ELYAVISLLT AGLYIVLKAY QLTEWINLVI CLSVGFSLRM LALRYHWSMP TFDYQANGDQ HTH
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