| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_1338 |
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| Symbol | |
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| ID | 7088763 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS223 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011663 |
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| Strand | - |
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| Start bp | 1570464 |
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| End bp | 1571183 |
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| Gene Length | 720 bp |
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| Protein Length | 239 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 643460242 |
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| Product | alanine racemase domain protein |
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| Protein accession | YP_002357269 |
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| Protein GI | 217972518 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0325] Predicted enzyme with a TIM-barrel fold |
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| TIGRFAM ID | [TIGR00044] pyridoxal phosphate enzyme, YggS family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00300901 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.000000312862 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | TTGCAACTAG ATAATTACAT CATGACAACA ATAGCAGACA GACTCGCAAT CGCCCAGCGC
AGGATCGCAC AAGCGGCGCA AAAATGTGCA CGCCAACCTA GCAGTATTCG CTTACTTGCC
GTCAGCAAGA CCAAACCTAT TGAAGACATT ATAGCAGCCT ATCAAGCGGG TCAGCGTTGC
TTTGGCGAAA ACTATGTCCA AGAAGGCGCG GAGAAAATTA CCGCACTAAA GGGGGATTTT
CCGGACATTG AATGGCACTT TATCGGGCCA CTCCAATCCA ACAAAACCAG CATAGTCGCC
CAGCATTTCG ATTGGATGCA CACTGTCTCG CGCGACAAAA TTGCCCAACG TCTCAATGAA
CAACGTCCAG CTGAATTAGC GCCATTAAAC ATCTGCATTC AAATTAATAT CAGTGCTGAA
GACACAAAAT CTGGCATAGA TGCGGCGCAA ATGCTGCCAC TGGCCGAGCT AATCGCTCAG
CTACCTAATC TCGCACTGAG AGGCCTAATG GCAATCCCAA CGGCTACCGC AGATACTGAG
TTACAGCTTA AAGAGTTTTC TATGTTAAAC AATCTATTTC AAGAACTTAA ATCGCATTAC
CCTAGTGTAG ACACGCTTTC CATGGGGATG AGTAATGACC TAGATGCAGC GATTAGCTGC
GGTTCAACTA TGGTGCGCAT TGGCAGTGCC ATTTTTGGTG AGCGAAATTA CGCTGCGTAA
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| Protein sequence | MQLDNYIMTT IADRLAIAQR RIAQAAQKCA RQPSSIRLLA VSKTKPIEDI IAAYQAGQRC
FGENYVQEGA EKITALKGDF PDIEWHFIGP LQSNKTSIVA QHFDWMHTVS RDKIAQRLNE
QRPAELAPLN ICIQINISAE DTKSGIDAAQ MLPLAELIAQ LPNLALRGLM AIPTATADTE
LQLKEFSMLN NLFQELKSHY PSVDTLSMGM SNDLDAAISC GSTMVRIGSA IFGERNYAA
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