Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_1330 |
Symbol | |
ID | 7088676 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | + |
Start bp | 1562428 |
End bp | 1563369 |
Gene Length | 942 bp |
Protein Length | 313 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 643460234 |
Product | transcriptional regulator, LysR family |
Protein accession | YP_002357261 |
Protein GI | 217972510 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00626709 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.000619665 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTTAGAAC TGTTAGAACC TATTGCGATT TTTACTCATG TGGCCAGAGC TGGTAGTTTT AGTGCCGCCG CAAGAAGGCT TGGGATCTCT AAGTCTAAGG TCAGTACACA AGTCGCCGAT CTTGAACATA GACTTGGTGT TCAATTAATC CAACGTACCA CCCGTAGCTT AAGCCTGACT GAAGCAGGGC ATTTGCTGTA TCTGCAAGGT GAAGAACTGC TGCGTGACGC TGAACAAGCG ATAGCCAGCG TGCATAACTT AAATGATGCG ACCCGCGGTG TGCTCAAGGT GGGGATTTCC CAATCCTTTG GGGTGATGCA TATCATTCCT GCGCTGCCAT CCTTTATGGC AAAACATCCT GAGCTTGAGC TACAAGTGAG CTTACTGGAC CATAAAGTAG ATGTAGTGAG TGAAGGCTTA GATTTATTGT TAACTATGTC GGAGCAATTA CCGCTTGGCA TGGTTGCTAG ACCTCTGATG AAGTGCCAAT TCCTGTTAGT TGCTTCTCCT GGCTATATTG CTCAACATGG CGAGCCAACT CGACCTGAGC AGTTAGTTGA CCACAATTGT TTGGTCTATC AAGGCGAGTG GCACGAGCAC AGCATGTGGC AATTTAAGAA GGGTGATGAT TACTGTGAAA TTGGCGTATC GGGCAATTTC AGGGTTGATA ACGCGCCAGC ATTAAAATCT GCTGCAATCA GTGGTCTTGG GGTTGTGTAT CTTGCAAGTT ATTTGATGGA AGATGAAATT GCCAAGGGAA CATTAGTGCC TTTACTGAAG GATTGGCAAT TGACCCACCA TCTGCCATTG CAGGCGGTTT ATCCCCGTCG TAAGCACTTA GCACCTAAGG TCAGTTCTTT TATCGAGTTC ATTAAAGATC ACATAGGAAC GCCCCCGTAT TGGGATGCGC CCTATGTCGA ATTATTCAGT AAACGTCAGT AA
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Protein sequence | MLELLEPIAI FTHVARAGSF SAAARRLGIS KSKVSTQVAD LEHRLGVQLI QRTTRSLSLT EAGHLLYLQG EELLRDAEQA IASVHNLNDA TRGVLKVGIS QSFGVMHIIP ALPSFMAKHP ELELQVSLLD HKVDVVSEGL DLLLTMSEQL PLGMVARPLM KCQFLLVASP GYIAQHGEPT RPEQLVDHNC LVYQGEWHEH SMWQFKKGDD YCEIGVSGNF RVDNAPALKS AAISGLGVVY LASYLMEDEI AKGTLVPLLK DWQLTHHLPL QAVYPRRKHL APKVSSFIEF IKDHIGTPPY WDAPYVELFS KRQ
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