| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_1323 |
|---|
| Symbol | |
|---|
| ID | 7089886 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS223 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011663 |
|---|
| Strand | + |
|---|
| Start bp | 1556728 |
|---|
| End bp | 1557303 |
|---|
| Gene Length | 576 bp |
|---|
| Protein Length | 191 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 643460227 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002357254 |
|---|
| Protein GI | 217972503 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2353] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.00141701 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.012746 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAGC AACTGTTAAG CGCACTGATT GGTGCATCTC TATTGGCTCC GATGGCGGCT
TCAGCGGCGG ACTATGTCAT TGACCGTGAA GGAGCACATG CCTCTATTAC TTTCAAAGTG
AGTCACTTAG GTTATAGCTA TGTCGTTGGT CGCTTTAATG ATTTTAGCGG TGACTTTAGC
TATGACGCGG CTAAACCCAC TGCGGCTAAA GTGAATGTGA CAGTAAATAC GCTTAGTGTG
GATTCAAACC ACGCCGAGCG TGACAAGCAT ATTCGTAGCG CCGATTTCCT AAACACGAGT
AAGTTTGCGC AAGCGACGTT TACCTCAACC ACAGTTGAAG ATAAAGGTAA TGGCGACTTA
GTGATTAACG GCAACTTAAC CTTAAATGGT GTCACTAAAC CATTAGCGAT CAATGCCCAT
GCCGTGGGCG AAGGTCAAGA TCCTTGGGGT GGCTACCGTG CCGGTTTTAC TGGCACAACC
ACGTTTGCGA TGAAAGATTT CGGTATCAAA ATGGATTTAG GCCCAGCATC AAGCCATGTT
GAGTTAGATC TTGTGGTTGA AGGCGTGCGT AAGTAA
|
|---|
| Protein sequence | MKKQLLSALI GASLLAPMAA SAADYVIDRE GAHASITFKV SHLGYSYVVG RFNDFSGDFS
YDAAKPTAAK VNVTVNTLSV DSNHAERDKH IRSADFLNTS KFAQATFTST TVEDKGNGDL
VINGNLTLNG VTKPLAINAH AVGEGQDPWG GYRAGFTGTT TFAMKDFGIK MDLGPASSHV
ELDLVVEGVR K
|
|---|
| |