| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_1308 |
|---|
| Symbol | |
|---|
| ID | 7089871 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS223 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011663 |
|---|
| Strand | + |
|---|
| Start bp | 1544322 |
|---|
| End bp | 1545350 |
|---|
| Gene Length | 1029 bp |
|---|
| Protein Length | 342 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 643460212 |
|---|
| Product | transcriptional regulator, MerR family |
|---|
| Protein accession | YP_002357239 |
|---|
| Protein GI | 217972488 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0789] Predicted transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACAAG ATACCCAGTC CATGACCAGC GATGAGCCCA ATGATGGCGT GTTACTCCCC
ATTGGTGAAG TGTCGGCCTT AACCGGCGTG AATGCCGTGA CCTTAAGGGC ATGGCAGCGC
CGTTTTGGTT TAGTGATCCC TGCGCGCACG CCCAAGGGAC ACAGATTATA TACGAGTGAA
AATATCCAAG AAATCCATGA GATTAATGCA TGGTTAGCTA AAGGTGTTGC GATCAGCAAG
GTTAAACCTT TGTTGATGAG TGCCGCCAAA TTATCAAGTG AAATGATTGA ATCCCAAGTT
GTCGATCTGT GGGGCGAGCA AATTACTGCG CTGAATGCGG CATTGTTCGA CTTCAATCAG
CATAAGTTGC ATCAGATATT AGACTATGCA TTTGGCTTAT ATCCGTTTCA ATTAGTGAAA
GAAAAGTTAC TGCAACCTTG GCTTAATCAA CTCGAGGACT TAGTGGATGA GCGGCTCGAT
GCCGAGTTAA TTCTCGCTTG GTTAAAAAGC GAATTACTCA GCCGAGTGGG TGGGCGTAAT
GCCTTTACCG GACAGGCCGT TGCGGCGCGA ATGGCTGTGG TGCAGTTATC CCGCGGCGCG
GCCACGCCGC CTAATTCTGC CCGTACTAAA AGTCTGTTTT CTTTGCTGCT ATCGCTCGAG
TTAGCGTCAC TTCGAGTATC GGTAATCGAC CTTGGCGAGC AGGCCATAGG CAGTTTACCA
CTGCTGCAGG GCAGGCTTAA CGTCGATGCG CTTTTGCTGA TCCCTGATCC AAATCATTCG
GGGTCTGAGC AGACTGAAAT GCTCACTGTA TTGGCACAAA TGAGTTTCCC ATGTCGATTT
GTTGGTCCCT TTGCGCCGAC GTTGATTTCC TTATCGGCTT TCTGGGCGCC TTCGATGACT
GACTTTATTG GACAAATGCC GTCTCGCTCT GTGGGGAAGG TCAACAGAAG TCACAAAGGC
AAAGGGAAAA GTATTGGCGT GAGTCAAAGC GAGCAGGGCA ATAGTGGAGA AAACAATGAC
ATCAGTTAA
|
|---|
| Protein sequence | MKQDTQSMTS DEPNDGVLLP IGEVSALTGV NAVTLRAWQR RFGLVIPART PKGHRLYTSE
NIQEIHEINA WLAKGVAISK VKPLLMSAAK LSSEMIESQV VDLWGEQITA LNAALFDFNQ
HKLHQILDYA FGLYPFQLVK EKLLQPWLNQ LEDLVDERLD AELILAWLKS ELLSRVGGRN
AFTGQAVAAR MAVVQLSRGA ATPPNSARTK SLFSLLLSLE LASLRVSVID LGEQAIGSLP
LLQGRLNVDA LLLIPDPNHS GSEQTEMLTV LAQMSFPCRF VGPFAPTLIS LSAFWAPSMT
DFIGQMPSRS VGKVNRSHKG KGKSIGVSQS EQGNSGENND IS
|
|---|
| |