Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_1297 |
Symbol | |
ID | 7089860 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | - |
Start bp | 1533243 |
End bp | 1533626 |
Gene Length | 384 bp |
Protein Length | 127 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 643460202 |
Product | endoribonuclease L-PSP |
Protein accession | YP_002357229 |
Protein GI | 217972478 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0251] Putative translation initiation inhibitor, yjgF family |
TIGRFAM ID | [TIGR00004] endoribonuclease L-PSP, putative |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0602283 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAACCA TTATTCACGC AGAAAGCGCT CCCGCAGCCA TTGGCCCTTA TTCACACGGT ACGAGCTATG GCAATCTCAT CTTCACCTCT GGCCAACTGC CCGTTTGTAA AGAGAAAGGC GGCGTGGTTG ACGGTGGGAT CACCGCACAA TCGATTCAGT CGCTAGAGAA TCTCAAATAC GTGCTTGAAG CGGGTGGCGG TAGCTTAGAA ACGGTTCTCA AAACCACTTG TTATCTTGCT GAGATCAGTG ACTTTGCCGC CTTTAACGAA GTGTATAAAA CCTATTTTAA AACCGACTGC CCTGCGCGTA GCTGTTTTGC GGTGAAGGAT CTTCCACTGG GCGTTAAAGT GGAAGTTGAA GCGATAGCAC ACGTGAAAAT TTAA
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Protein sequence | MKTIIHAESA PAAIGPYSHG TSYGNLIFTS GQLPVCKEKG GVVDGGITAQ SIQSLENLKY VLEAGGGSLE TVLKTTCYLA EISDFAAFNE VYKTYFKTDC PARSCFAVKD LPLGVKVEVE AIAHVKI
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