Gene Sbal223_1297 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal223_1297 
Symbol 
ID7089860 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS223 
KingdomBacteria 
Replicon accessionNC_011663 
Strand
Start bp1533243 
End bp1533626 
Gene Length384 bp 
Protein Length127 aa 
Translation table11 
GC content48% 
IMG OID643460202 
Productendoribonuclease L-PSP 
Protein accessionYP_002357229 
Protein GI217972478 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0251] Putative translation initiation inhibitor, yjgF family 
TIGRFAM ID[TIGR00004] endoribonuclease L-PSP, putative 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0602283 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACCA TTATTCACGC AGAAAGCGCT CCCGCAGCCA TTGGCCCTTA TTCACACGGT 
ACGAGCTATG GCAATCTCAT CTTCACCTCT GGCCAACTGC CCGTTTGTAA AGAGAAAGGC
GGCGTGGTTG ACGGTGGGAT CACCGCACAA TCGATTCAGT CGCTAGAGAA TCTCAAATAC
GTGCTTGAAG CGGGTGGCGG TAGCTTAGAA ACGGTTCTCA AAACCACTTG TTATCTTGCT
GAGATCAGTG ACTTTGCCGC CTTTAACGAA GTGTATAAAA CCTATTTTAA AACCGACTGC
CCTGCGCGTA GCTGTTTTGC GGTGAAGGAT CTTCCACTGG GCGTTAAAGT GGAAGTTGAA
GCGATAGCAC ACGTGAAAAT TTAA
 
Protein sequence
MKTIIHAESA PAAIGPYSHG TSYGNLIFTS GQLPVCKEKG GVVDGGITAQ SIQSLENLKY 
VLEAGGGSLE TVLKTTCYLA EISDFAAFNE VYKTYFKTDC PARSCFAVKD LPLGVKVEVE
AIAHVKI