Gene Sbal223_1296 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal223_1296 
Symbol 
ID7089859 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS223 
KingdomBacteria 
Replicon accessionNC_011663 
Strand
Start bp1531944 
End bp1533218 
Gene Length1275 bp 
Protein Length424 aa 
Translation table11 
GC content51% 
IMG OID643460201 
Productprotein of unknown function DUF1063 
Protein accessionYP_002357228 
Protein GI217972477 
COG category[S] Function unknown 
COG ID[COG3681] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.351062 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACCCC AATGGCAGCA GTATATTAAC ATCATCAAAC AAGTCGTTAA GCCCGCATTA 
GGCTGCACTG AGCCCATCGC CGCCGCTTAC GCCGCCGCCG TCGCTCGCGC CTTACTGGGT
GTTGAGCCCG ATTCAATTGC GGTACAAGTG TCTGACAATC TTTATAAAAA CTCTATGGGT
GTGTTTGTGC CTGGTACAGG CAAAATCGGT CTGGCAATTG CCGCAGCGGC AGGCGCCATT
GCCGGTAATC CTGATGCGGG TTTAGAAGTA TTGGCAGTGA TCACGCCAGA ACAAGTTGCT
AGAGCACAGG CACTGATCGA TGCGGGTAAA GTCACCGTCG AGCGCACTGA AACGGCAGAA
TTTATCTATT GCTGTGTTAT CGCAAAAAAA GGCGACCGCG AAGCCCTAGT GAAAATCTGT
GGTGGCCATA CGCTTATTGC CGAAAAGCGC CTCAACGGCG AATCCGTCTT CAGTGTCGAT
AGCACGCAAG CTAAAGCCAC GGGTTCCATC TGTGAAGGCG TGGATATCAC TATCGAATCC
ATTTATCGCT TCGCCCAAGA AGTCCCCTTC GAAGAGATCA AGTTCATCCT CGAGGCCTCT
GAGTTAAACG GTAAATTATC CGATGAAGGC ATGGCCAATC CCTATGGACT CGAAGTCGGC
CGCACCATGA AAAGCGGCAT CGCCGCGGGC ATTATTGGTG AAGATTTGCT CAATAAAATC
GTGATGTTAA CGGCTGCCGC CTCAGATGCG CGCATGGGCG GTGCTAACTT GCCCGCCATG
AGTAATCTTG GCAGTGGCAA TCAAGGCATC GCCGCGACCA TTCCCGTGGT ATTAACGGCG
CAATGCTATA AGGTTTCGGA AGAACAGCTC GCCCGCGCGT TGATCATGAG CCATCTCGGG
GCGATTTATA TTAAGTCCCA TTACCCACCG CTGTCGGCAT TTTGTGGCAA TACAGTCACC
AGCGCCGCCG CGTCTATGGC CATGGTGTAT TTGGCAGGAG GTTCGTTCGA ACAATCCTGT
TTCGCGATTC AAAACGTGAT CAGTGACAGC TCGGGCATGG TGTGTGACGG CGCTAAAGCT
TCCTGCGCAA TGAAGGTCAG CACGTCCTCC AGTGCGGCCG TGCGCTCATT TTTGATGGCG
CTCAGTAGTC ACAATGTCTC CGGCCAAGGT ATTATTGCAA CCGATGTTGA AAAAACCATT
AAAAACATTG GCAAAATGAT CCTCAATGGC ATGTCATCCA CAGATGTCAC TATTATCGAT
ATTATGTCGG CATAA
 
Protein sequence
MKPQWQQYIN IIKQVVKPAL GCTEPIAAAY AAAVARALLG VEPDSIAVQV SDNLYKNSMG 
VFVPGTGKIG LAIAAAAGAI AGNPDAGLEV LAVITPEQVA RAQALIDAGK VTVERTETAE
FIYCCVIAKK GDREALVKIC GGHTLIAEKR LNGESVFSVD STQAKATGSI CEGVDITIES
IYRFAQEVPF EEIKFILEAS ELNGKLSDEG MANPYGLEVG RTMKSGIAAG IIGEDLLNKI
VMLTAAASDA RMGGANLPAM SNLGSGNQGI AATIPVVLTA QCYKVSEEQL ARALIMSHLG
AIYIKSHYPP LSAFCGNTVT SAAASMAMVY LAGGSFEQSC FAIQNVISDS SGMVCDGAKA
SCAMKVSTSS SAAVRSFLMA LSSHNVSGQG IIATDVEKTI KNIGKMILNG MSSTDVTIID
IMSA