Gene Sbal223_1289 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal223_1289 
Symbol 
ID7089852 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS223 
KingdomBacteria 
Replicon accessionNC_011663 
Strand
Start bp1525451 
End bp1526656 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content44% 
IMG OID643460194 
Productprotein of unknown function DUF405 
Protein accessionYP_002357221 
Protein GI217972470 
COG category[S] Function unknown 
COG ID[COG2311] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.34904 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCAACCA ACTTACCTAA AGACCCTTGG TCAAGAACAG ACTCCACGCA GCCAGTCGTA 
ATGACGATTC CTGCACAGCG TAATGCCAAT CTCGATGCCA TTCGCGGCTT AGCCGTGTTG
GGGATATTTT TTATGAATAT CTATTTTATG GGCATTACTT TTTTTGGCTA TGCGCCCCAC
GAAACGCCGC CGCTGTCGGA TCACATAATC AAAGTGTTCA GTAACTTTTT CATCGAGGCG
CGCTTTATCA GTCTGTTTTC CATCTTGTTT GGCGTCGGGC TTTTTATTCA ATATCAGCGA
TTTAGCGCCA AAGGCCTAGA AGCATATCCT TTACTGCGCT CACGTTTGAA ATGGCTAATG
GTATTTGGCC TACTCCACGG CATCATTATC TGGCCTGGTG ATATTTTATT AACCTATGGG
ATCAGCGGAT TTTTAGCTTT GTGTTACAAA GATTTAAGTA TTGAAGCCCT TAAGCGCAAA
GCGAATATTT TTATTTTAAG CGCCTTAGTG ATCATCACGC TGATTAGCCT TACGGGCAGC
GATGAACCTT TCACTCGAGA ATCGAGTCTA TTTGCAGAGC AATACAGCGC ATGGACCTCA
GGCTATGCCG ACCAACTGTT TCTGCATTTG ATGCAAGTGG GTTATATGGC GCTGGTGATC
CCTTTTACCA TAATGTGGTT TACTGCGGGC TTGATGCTGC TTGGCATGGC CTTGTATCAA
CAGGGAACTT TTGAGCGGGG TTTTAGCAAG CCACAACTGC TGAAATTAGT GCTAGCCAGC
GTGACGGTAT CGCTACTCGA TACCGGTTTA GACTTTACGA ACAATCCTAT TCTAGTCACG
TTTTCAGATG TGTTAATCAT GCTAAGCGCT ATTCCTATGG CGCTGATTTA CATTCATATT
ATGGTTAAAA TTTGCCAAAA TAATCCTAAT AGACTCACGC CACTGCAAAA TGTTGGCAAA
CTTGCTTTTA GTCTCTATAT TCTGCAATCC ATCGTTGGCG TGTTAGTGTT TAGACACTTA
GCTCCAGAAT TGCTATTGAG TCTAGACAGA TGGGGATACA TGGCCATGGC ACTGGTTTAT
TCAGTAGTGC AATTACTGTT AGCCAACCTG TACTTACGCT ATTTCAAGCA AGGGCCATTG
GAAAAACTTT GGCGCCACCT CGCGTTTAAA AAATACGCTG CATCACAAGA ACGCCAGCAA
GCTTAA
 
Protein sequence
MPTNLPKDPW SRTDSTQPVV MTIPAQRNAN LDAIRGLAVL GIFFMNIYFM GITFFGYAPH 
ETPPLSDHII KVFSNFFIEA RFISLFSILF GVGLFIQYQR FSAKGLEAYP LLRSRLKWLM
VFGLLHGIII WPGDILLTYG ISGFLALCYK DLSIEALKRK ANIFILSALV IITLISLTGS
DEPFTRESSL FAEQYSAWTS GYADQLFLHL MQVGYMALVI PFTIMWFTAG LMLLGMALYQ
QGTFERGFSK PQLLKLVLAS VTVSLLDTGL DFTNNPILVT FSDVLIMLSA IPMALIYIHI
MVKICQNNPN RLTPLQNVGK LAFSLYILQS IVGVLVFRHL APELLLSLDR WGYMAMALVY
SVVQLLLANL YLRYFKQGPL EKLWRHLAFK KYAASQERQQ A