| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_1283 |
|---|
| Symbol | |
|---|
| ID | 7089846 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS223 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011663 |
|---|
| Strand | + |
|---|
| Start bp | 1518192 |
|---|
| End bp | 1518977 |
|---|
| Gene Length | 786 bp |
|---|
| Protein Length | 261 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 643460188 |
|---|
| Product | ROK family protein |
|---|
| Protein accession | YP_002357215 |
|---|
| Protein GI | 217972464 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
|---|
| COG ID | [COG1940] Transcriptional regulator/sugar kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.876816 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.591564 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAATAC TAACAATAGA TGTGGGCGGT ACGACAGCCC TGTTCGAACT TCAGCTCGCG
GGACATACAG AACAATATAA AATCCCCACA GGCGAAGGTT TTAAAATTGA AGAGTTAAAT
AATCAAATCG CTGCGCTTGA ACGCGATTAC GATTTACAAG ATTACCAATT AGCGATTGGC
GTACCTGGAC TCGTACAAAA TAATCGTTTG GTTGCCTGTA AATCATTACC CGGGCTCAGT
GGCTTGAGCT TCGATACAGT GAAAACCCAA GGTGAGCTTA AGTTTATCTG CAACGATATG
GATGCGGGTA TGCAAGCCAC GTGCGATGCC AAATATGCCT GTGAGTTGTT GGTCATGTGC
GGTACAGGGA TAGGGATGTC GATTGCGTTT AATGGGCAAG CTTTTACTGG AGCGACAGGG
GTGGCAGGGG AGTTGGGCCA TTGCCGCGTG ATGACAGAAT CAGGCGAATT TAGTTTAGAA
CAACTCGCCA GTGGCGATTC TGTACGCAGC CGTAACATCA CCACTCAGGA TGATTTATAC
CGTGCGGGCA GTTACCTTGG TATGGGGCTG GCGTGGACCG TTAATTTGTT TAATCCCAAT
CGGATTTGGC TCGCGGGTAA CATGATGAAC AGTGCTCCTT ACTACAAAGG CTGCCTCGAA
AGCTTAAAGC AAATGGCATT GAGCGCGCCC TTAGCTGAGA TGAAAATCAA CCGCGTCGAT
GATATGGAAA CCTTAGTGTG CCGAGGTTTA TCTGTGATGC TCGCAAGGGA TTATCCTCGC
GCATAA
|
|---|
| Protein sequence | MQILTIDVGG TTALFELQLA GHTEQYKIPT GEGFKIEELN NQIAALERDY DLQDYQLAIG
VPGLVQNNRL VACKSLPGLS GLSFDTVKTQ GELKFICNDM DAGMQATCDA KYACELLVMC
GTGIGMSIAF NGQAFTGATG VAGELGHCRV MTESGEFSLE QLASGDSVRS RNITTQDDLY
RAGSYLGMGL AWTVNLFNPN RIWLAGNMMN SAPYYKGCLE SLKQMALSAP LAEMKINRVD
DMETLVCRGL SVMLARDYPR A
|
|---|
| |